31 homologs were found in PanDaTox collection
for query gene DhcVS_605 on replicon NC_013552
Organism: Dehalococcoides sp. VS



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013552  DhcVS_605  carbon-monoxide dehydrogenase delta subunit  100 
 
 
313 aa  638    Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0701  acetyl-CoA decarbonylase/synthase complex subunit delta  98.08 
 
 
313 aa  625  1e-178  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0667  acetyl-CoA decarbonylase/synthase complex subunit delta  98.08 
 
 
313 aa  625  1e-178  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0636  acetyl-CoA decarbonylase/synthase complex subunit delta  89.74 
 
 
313 aa  579  1e-164  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_3186  acetyl-CoA decarbonylase/synthase complex subunit delta  55.27 
 
 
518 aa  382  1e-105  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.00359693  n/a   
 
 
-
 
NC_008554  Sfum_2567  acetyl-CoA decarbonylase/synthase complex subunit delta  53.5 
 
 
314 aa  371  1e-102  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.950676  normal 
 
 
-
 
NC_013216  Dtox_1275  acetyl-CoA decarbonylase/synthase complex subunit delta  44.55 
 
 
316 aa  280  3e-74  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000110977  normal 
 
 
-
 
NC_013385  Adeg_0340  acetyl-CoA decarbonylase/synthase complex subunit delta  48.18 
 
 
314 aa  272  5.000000000000001e-72  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1198  acetyl-CoA decarbonylase/synthase complex subunit delta  46.76 
 
 
323 aa  270  2e-71  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_0875  acetyl-CoA decarbonylase/synthase complex subunit delta  43.59 
 
 
326 aa  270  2e-71  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0114  acetyl-CoA decarbonylase/synthase complex subunit delta  41.12 
 
 
298 aa  262  4.999999999999999e-69  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2793  acetyl-CoA decarbonylase/synthase complex subunit delta  43.89 
 
 
322 aa  260  2e-68  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0862  acetyl-CoA decarbonylase/synthase complex subunit delta  34.08 
 
 
439 aa  189  8e-47  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.0000248754  n/a   
 
 
-
 
NC_009135  MmarC5_0801  acetyl-CoA decarbonylase/synthase complex subunit delta  35.39 
 
 
384 aa  187  2e-46  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009975  MmarC6_1677  acetyl-CoA decarbonylase/synthase complex subunit delta  35.39 
 
 
384 aa  186  3e-46  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0223  acetyl-CoA decarbonylase/synthase complex subunit delta  35.06 
 
 
384 aa  185  7e-46  Methanococcus maripaludis C7  Archaea  normal  0.584126  normal 
 
 
-
 
NC_009634  Mevan_0307  acetyl-CoA decarbonylase/synthase complex subunit delta  33.97 
 
 
384 aa  179  4e-44  Methanococcus vannielii SB  Archaea  normal  0.0739489  n/a   
 
 
-
 
NC_009712  Mboo_1195  acetyl-CoA decarbonylase/synthase complex subunit delta  36.39 
 
 
315 aa  176  3e-43  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.0226157 
 
 
-
 
NC_009635  Maeo_0210  acetyl-CoA decarbonylase/synthase complex subunit delta  32.82 
 
 
396 aa  176  4e-43  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_008553  Mthe_0288  acetyl-CoA decarbonylase/synthase complex subunit delta  35.37 
 
 
452 aa  172  7.999999999999999e-42  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_0804  acetyl-CoA decarbonylase/synthase complex subunit delta  36.59 
 
 
321 aa  170  3e-41  Methanosphaerula palustris E1-9c  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A0430  acetyl-CoA decarbonylase/synthase complex subunit delta  34.9 
 
 
438 aa  169  6e-41  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.0518916  normal 
 
 
-
 
NC_007355  Mbar_A0200  acetyl-CoA decarbonylase/synthase complex subunit delta  33.44 
 
 
440 aa  169  6e-41  Methanosarcina barkeri str. Fusaro  Archaea  hitchhiker  0.00697481  normal 
 
 
-
 
NC_009712  Mboo_1370  acetyl-CoA decarbonylase/synthase complex subunit delta  33.33 
 
 
411 aa  160  3e-38  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal  0.377223 
 
 
-
 
NC_007796  Mhun_0687  acetyl-CoA decarbonylase/synthase complex subunit delta  34.18 
 
 
416 aa  154  1e-36  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_008553  Mthe_0287  acetyl-CoA decarbonylase/synthase complex subunit gamma  23.23 
 
 
470 aa  61.6  0.00000002  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_007955  Mbur_0863  acetyl-CoA decarbonylase/synthase complex subunit gamma  21.89 
 
 
468 aa  56.6  0.0000005  Methanococcoides burtonii DSM 6242  Archaea  normal  0.0228228  n/a   
 
 
-
 
NC_007796  Mhun_0686  acetyl-CoA decarbonylase/synthase complex subunit gamma  20.07 
 
 
476 aa  48.1  0.0002  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_007355  Mbar_A0199  acetyl-CoA decarbonylase/synthase complex subunit gamma  22.65 
 
 
469 aa  45.8  0.001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.287834  normal 
 
 
-
 
NC_007355  Mbar_A0429  acetyl-CoA decarbonylase/synthase complex subunit gamma  22.65 
 
 
469 aa  45.8  0.001  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.400713  normal  0.82732 
 
 
-
 
NC_013552  DhcVS_603  carbon-monoxide dehydrogenase, corrinoid/iron-sulfur protein, gamma subunit  21.72 
 
 
448 aa  42.7  0.009  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>