| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mthe_0288 |
|---|
| Symbol | |
|---|
| ID | 4463267 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanosaeta thermophila PT |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008553 |
|---|
| Strand | - |
|---|
| Start bp | 286544 |
|---|
| End bp | 287902 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639699294 |
|---|
| Product | acetyl-CoA decarbonylase/synthase complex subunit delta |
|---|
| Protein accession | YP_842725 |
|---|
| Protein GI | 116753607 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2069] CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) |
|---|
| TIGRFAM ID | [TIGR00381] CO dehydrogenase/acetyl-CoA synthase, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGG AGAAGAAGAT CAAGTTATCA GATCTGAACA AGACTTTGGC GCAATACGGC
GTGGAGGCCC TTGAGGGTGT ATCCATCGAG GGCGATATAG AGATCGAGAT AGATACCGGG
GCTGCCGGCA TAGGGCCGCT CTTCGCCTAC TACTTCGGCC AGGAGGTTGC CCAGATCGCG
GTGCAGCTCG TCAAGTTCGC CAGGAGCATG GGGTATCCGG TAGATGCTCT GCTCCAGCCT
GCTGCAGTTG CGCATGCTAT ATCTCCAGCC CCTGCTGAGG TTGTTGAGGC GGCGGCCAAG
GTCCCAGAGT GGAAGGTCGC CACCAGCCTG GTCCAGGCGA AGTTCCAGGT TGGAATCGAT
GAGACGTGGA AGTATCCAAT CCAGGAGGTG ACGCTTGGGG CCACTAAGGC AGATGGCGGA
AGCAGAGGCC ACACGATCAA GATAGGAGGG GAGAAGGCGC TGCCGTTCTT CTATGATGCG
CCAATGCCGC ACAGGCCCGT GGTCACAATG GACGTCTTCG ATATGCCCAT CGGCATGGCA
AAGGCTGTGA AGATGCACTA CGAGGATGTC ATCAACGATC CCGGCGAGTG GGCGAAGAAG
GCAGTCACAA AGTTCGGTGC CGATCTCGTC ACGATACACC TCATAAGCAC AGATCCCCTC
CTGAAGGATA CTCCTCCCAG AGAGGCAGCG AAGACTGTGG AGGAGGTTCT CCAGGCTGTG
GATGTCCCGA TATGCATCGG TGGCTCCGGC AATCCGGACA AGGATCCTGA GGTTCTCAAA
GCTGCTGCAG AAGTCGCACA GGGCGAACGC GCGCTGATCG CAAGCGCCAA CCTGAACATG
GACTGGGAGA AGATAGGGAG GGCATGCGTG GACAACGGTC ATGTCTGCCT GGCATGGACG
CAGCTCGAGA TCAACTCCCA GAAGGAGCTC AACAGGAAGC TCATGAAGGT CGCAGGCGTG
CCGAGGGAGT CCATAGTGAT GGATCCAACA ACGGCTGCTC TCGCCTATGG TCTCGACTTC
GCGTACACCA ACATGGAGCG CATAAGGCTT GGAGCGCTTA AGGGAGACGA GGAGCTTACA
TTCCCGATGT CCTCAGGCAC GACAAACGCA TGGGGCGTCA GGGAGGCCTG GATGGTCCGC
TCGCCCAACA AGGAGGACTC CGACTGGGGC GACAGGATGC TCAGAGGCCC GATCTGGGAG
ATCATCACCG GATTCTCGCT TGCGATGGCG GGCGTGGATA TATTCATGAT GATGCATCCT
CTTGCGGTCG CCTACCTCCA GGAGATCACA CAGACTCTCA TGGGACTGAT AGATGCGGAG
ACTCCTGATA TAACCAACTG GGTCAAGATG GAGGTCTGA
|
|---|
| Protein sequence | MAEEKKIKLS DLNKTLAQYG VEALEGVSIE GDIEIEIDTG AAGIGPLFAY YFGQEVAQIA
VQLVKFARSM GYPVDALLQP AAVAHAISPA PAEVVEAAAK VPEWKVATSL VQAKFQVGID
ETWKYPIQEV TLGATKADGG SRGHTIKIGG EKALPFFYDA PMPHRPVVTM DVFDMPIGMA
KAVKMHYEDV INDPGEWAKK AVTKFGADLV TIHLISTDPL LKDTPPREAA KTVEEVLQAV
DVPICIGGSG NPDKDPEVLK AAAEVAQGER ALIASANLNM DWEKIGRACV DNGHVCLAWT
QLEINSQKEL NRKLMKVAGV PRESIVMDPT TAALAYGLDF AYTNMERIRL GALKGDEELT
FPMSSGTTNA WGVREAWMVR SPNKEDSDWG DRMLRGPIWE IITGFSLAMA GVDIFMMMHP
LAVAYLQEIT QTLMGLIDAE TPDITNWVKM EV
|
|---|
| |