| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0114 |
|---|
| Symbol | |
|---|
| ID | 6026322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | + |
|---|
| Start bp | 124222 |
|---|
| End bp | 125118 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641592967 |
|---|
| Product | acetyl-CoA decarbonylase/synthase complex subunit delta |
|---|
| Protein accession | YP_001716314 |
|---|
| Protein GI | 169830332 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2069] CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) |
|---|
| TIGRFAM ID | [TIGR00381] CO dehydrogenase/acetyl-CoA synthase, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGT TTCTGGAGGC CTATAAAGGG AATATCCTCG AGGTGACTTT CGGGAAAGAG
GGCAAAACAC TTACCCTCGG CGGGGAAAAC ACGCTTCCTT TTCATTCATT TGAAGGCAAT
CTGCCTCACC CTCCGCTGAT TGCGCTGGAG ATCTGGGATA TCCCGCCGCA AACCTGGCCG
GAACACCTGC GCGCATGCTT CGGCGACGTC GTCTCCTCGC CGGTGGCGTG GGCAAAAAAA
TGTCTGGAGG TGTACCGGGC GGATCTGGTT TGTCTCTACC TGGCTTCCGC CGGGAGGGAA
GAGGTAGACA TGGCGGCTTT AGCGTCCAGG GTAAAGGAAT TGAGCGACAC CCTGCCGGTG
CCTTTGATCG TTTACGGGGT CGGCGAAAAG GACGCTGATG CCCGGGCACT GAAAGAGATC
GCCAGAGCCT GCGCCGGGAA CGCCGTACTC CTGGGGCCGG TGGTCAAGGA GAACTACGAG
GAGGTCGGGA GGGCGGCCCT GGAGTACGGG CATAGGCTAA TCGTCCAATC CCCGCTGGAC
ATTAACCTGG CCAAAGAACT AAACATCAAG CTGTCCAAGT TCTTTCCCAG GGAGCGGATG
GTCATCGACC CCTTGTCCTC GGCCCTGGGG TACGGTATGG AGTACAGCTT TTCGGTCATG
GAGCGGATTA AACAGGTGGC GGTGCTATAC GGCGACGACA CGATGAAAAT GCCCATGATT
GCGAACGTCG GCAGGGAATG CTGGAAAACA AAAGAAGCCC GGGGGAACGC CCAGCAGGGA
CTTCTCTGGG AAGCCATAAC AACCCTGACC CTGTTCCTGG CCGGAGCCAA CCTCGCCGTA
ATGAGTTCAC CGGACAGCAT GCAACTGGTG CGGAGAATGA TCACTCAGAT GTCTTAA
|
|---|
| Protein sequence | MKEFLEAYKG NILEVTFGKE GKTLTLGGEN TLPFHSFEGN LPHPPLIALE IWDIPPQTWP
EHLRACFGDV VSSPVAWAKK CLEVYRADLV CLYLASAGRE EVDMAALASR VKELSDTLPV
PLIVYGVGEK DADARALKEI ARACAGNAVL LGPVVKENYE EVGRAALEYG HRLIVQSPLD
INLAKELNIK LSKFFPRERM VIDPLSSALG YGMEYSFSVM ERIKQVAVLY GDDTMKMPMI
ANVGRECWKT KEARGNAQQG LLWEAITTLT LFLAGANLAV MSSPDSMQLV RRMITQMS
|
|---|
| |