Gene Mbar_A0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0200 
Symbol 
ID3625435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp234079 
End bp235401 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content50% 
IMG OID637699091 
Productacetyl-CoA decarbonylase/synthase complex subunit delta 
Protein accessionYP_303764 
Protein GI73667749 
COG category[C] Energy production and conversion 
COG ID[COG2069] CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein) 
TIGRFAM ID[TIGR00381] CO dehydrogenase/acetyl-CoA synthase, delta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00697481 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGA AAGTTAAGTT ATCAGATATG ACAGACATGT TCAAGGACAT GGAGATATTA 
GCCCTTGAAG GTGTAACCAT TGAAGGGGAC ATTGAGCTTG ATCTTAGTGG ACTCGGAGGT
GGCTTTGACC CGATGCTTGC TGCTCTCCTT GGGCAGGAGA ATGCAGTACT TGCACAGCAC
TTCGCAAGAC TTGCTAGCAT GTTTGGTGTC CCTGTAGGTT TTGGTGCCGC TGGTGCTCCT
GCCGCTGCTC CTGAAATTTC TCCTGCTCTT GCAGCCCCGA AACTTAAGGA TCTCATTCCT
GCCAAATTCG ATGTTGCAAA CATTTCAGAA TGGGCAAGCC AGATTCAGGA AGTCCCAATA
GGCAACACCT CTGCCGACGG CGGCAGCCGT GGCAAGAGGG TCATGCTCGG TGGCGAGAAA
GCTCTTCCTT TCTTCCCTGA CGCCCCAATG CCCAACAGGA ACCAGGTTAC CATTGATGTA
TTCGATATGA GAATTGGTCT TGCAAAAGCT GTCAAGGTGA ACTATGATGA AGTAATGGAC
AGCCCTGGAG AATGGGCAAA GAAGAATGTT GAGAAGTTCA ACGCCGACAT GATTACAATC
CACCTGATCT CAACAGACCC ACTGATTAAG GATACACCTG CAAAGGAAGC AGCCAAGACT
GTAGAAGAAG TACTGCAGGC TGTTGATGTT CCAATCGCAA TCGGCGGTTC AGGTAACCCA
CAGAAAGACC CCGAGGTTCT TGCAAAAGCT GCCGAAGTTG CCGAAGGCGA GCGCTGCCTC
ATTGCATCTG CCAGCCTGAA CCTCGACTAT GCCAAGATTG CGGAAGCTGC ATTAAAGTAT
GACCACGATG TTCTGTCCTG GACCCAGCTT GATATGAACT CACAGAAAGA ACTTAACAGG
AAGCTCATGA AGCAGTGCAA CGTTCCAAGA GACAGGATCA TCATGGACCC AACCACTGCC
GCCCTCGGTT ATGGTCTCGA CTATGCCTAC ACCAACATGG AGCGTATCCG CCTTGCCGCC
CTTATGGGTG ACGATGAACT GACTTTCCCA ATGTCTTCTG GTACCACTAA CGCCTGGGGT
GCCCGTGAGT CCTGGATGGT TAGCTCCCCA CTGAAGGAAG ATTCTGACTG GGGTCCCAGA
GAGTACAGAG GTCCTATCTG GGAAATCATT ACAGGTCTGT CCCTTGCCAT TGCAGGAAAC
GACCTCTTCA TGATGATGCA CCCAACATCA GTTGCTGTCC TGAAGCAGAT TACCCAGACA
TTATTTGGTT CAATGGAGGC AGAGCCTGTT GACATTGCTA ACTGGATCGG AGCGGAGGTG
TAA
 
Protein sequence
MAKKVKLSDM TDMFKDMEIL ALEGVTIEGD IELDLSGLGG GFDPMLAALL GQENAVLAQH 
FARLASMFGV PVGFGAAGAP AAAPEISPAL AAPKLKDLIP AKFDVANISE WASQIQEVPI
GNTSADGGSR GKRVMLGGEK ALPFFPDAPM PNRNQVTIDV FDMRIGLAKA VKVNYDEVMD
SPGEWAKKNV EKFNADMITI HLISTDPLIK DTPAKEAAKT VEEVLQAVDV PIAIGGSGNP
QKDPEVLAKA AEVAEGERCL IASASLNLDY AKIAEAALKY DHDVLSWTQL DMNSQKELNR
KLMKQCNVPR DRIIMDPTTA ALGYGLDYAY TNMERIRLAA LMGDDELTFP MSSGTTNAWG
ARESWMVSSP LKEDSDWGPR EYRGPIWEII TGLSLAIAGN DLFMMMHPTS VAVLKQITQT
LFGSMEAEPV DIANWIGAEV