| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_605 |
|---|
| Symbol | cdhD |
|---|
| ID | 8657541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 570331 |
|---|
| End bp | 571272 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | carbon-monoxide dehydrogenase delta subunit |
|---|
| Protein accession | YP_003330082 |
|---|
| Protein GI | 270308024 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTG AAACACCTAA AATAAACTAC AACGGCCGTA TCAAGGAAAT AACTCTGGGT
GAAGGCCCGA AAGCCGTCAC TGTAGGCGGT GAAACTTCCA TGCCCTTTTA CCTGTTTGAG
GGGGAAATGC CCCGCAAACC TAAAATAGCC ATGGAAATAC AGGACACCCC GCCCGAAGAT
TGGCCGGAAG ATGTTTTAAA GCCCTTTGGG GATGCAGTCA ATAACCCGGT CAGCTGGGCT
AAAAAATGTG TTGATACATA CGGGGCGGAA CTTATCTGCC TTCAACTGGA AAGCACTGAC
CCGAACGGGA TTGACCGCTC TGCCGAAGAG GCTGCCAAAA TTGTCCGGGA AGTGGCAGAT
GCCGTGGATG TACCCCTGAT AGTCTGGGGA ACGGCTAACC ATGAAAAGGA CACCGAGGTA
CTCCGCAAGG CAAGTGAAGC CTGCCCTGAT AAAAAGCTTA TACTTGGGCC GGTGGAAGAG
GGTGACTATA AGAAAATAGC CGCCCAGGCC ATGGCCTATA AACATACTAT TATCGCTTCG
TCACCCATAG ATATAAACTT GGCTAAACAG CTTAATATCC TGCTGGGCAA TCTGGGTGTA
CCCGCCGAAG GGCTGATTAT GGACCCCACT GTCAGCAGCA TAGGATACGG CATAGAATAT
TCGTATTCGG TGATAGAACG CACCCGTCTG GCGGCGCTCA CCCAGCAGGA CGAACGCCTC
CAGTACCCCC TTATCTGCAA TATAGGGCGG GAAGCCTGGA AAACCAAAGA AGCTAAAATA
CCTGAAGCGG AAAGCCCGGA AATGGGCCAT ACCGAAAAAC GGGCTATTAT GATTGAAGCT
ATGTCCGCTG CTATTTTACT TATTGCCGGG GCGGATATAC TGGTAATACG CCATCCGGAA
TCCATGCGGC TGGCGGGTGA ACTGATAGAC GAACTTAGCT AA
|
|---|
| Protein sequence | MPFETPKINY NGRIKEITLG EGPKAVTVGG ETSMPFYLFE GEMPRKPKIA MEIQDTPPED
WPEDVLKPFG DAVNNPVSWA KKCVDTYGAE LICLQLESTD PNGIDRSAEE AAKIVREVAD
AVDVPLIVWG TANHEKDTEV LRKASEACPD KKLILGPVEE GDYKKIAAQA MAYKHTIIAS
SPIDINLAKQ LNILLGNLGV PAEGLIMDPT VSSIGYGIEY SYSVIERTRL AALTQQDERL
QYPLICNIGR EAWKTKEAKI PEAESPEMGH TEKRAIMIEA MSAAILLIAG ADILVIRHPE
SMRLAGELID ELS
|
|---|
| |