10 homologs were found in PanDaTox collection
for query gene Dfer_3830 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_3830  conserved hypothetical protein, membrane  100 
 
 
167 aa  327  3e-89  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.681919  normal  0.246717 
 
 
-
 
NC_013730  Slin_5927  hypothetical protein  50.6 
 
 
168 aa  147  6e-35  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_1405  rod shape-determining protein MreD  37.75 
 
 
168 aa  95.9  2e-19  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.575841  n/a   
 
 
-
 
NC_008255  CHU_3306  hypothetical protein  34.94 
 
 
173 aa  80.1  0.00000000000001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0806  rod shape-determining protein MreD  33.33 
 
 
171 aa  78.6  0.00000000000004  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.785243 
 
 
-
 
NC_013132  Cpin_0192  rod shape-determining protein MreD  37.04 
 
 
169 aa  73.9  0.0000000000008  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_014230  CA2559_00575  putative transmembrane protein  33.33 
 
 
167 aa  72.4  0.000000000003  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.477275  n/a   
 
 
-
 
NC_009441  Fjoh_1456  hypothetical protein  28.91 
 
 
168 aa  60.1  0.00000001  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_002950  PG1394  hypothetical protein  30.2 
 
 
172 aa  59.3  0.00000002  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.0587258 
 
 
-
 
NC_010830  Aasi_1508  hypothetical protein  31.75 
 
 
185 aa  55.1  0.0000005  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal 
 
 
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