10 homologs were found in PanDaTox collection
for query gene Cpin_0192 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_0192  rod shape-determining protein MreD  100 
 
 		 169 aa  325  3e-88  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_0806  rod shape-determining protein MreD  36.31 
 
 		 171 aa  103  1e-21  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.785243 
 
 
-
 
NC_008255  CHU_3306  hypothetical protein  31.33 
 
 		 173 aa  95.9  2e-19  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_3830  conserved hypothetical protein, membrane  36.09 
 
 		 167 aa  90.5  1e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.681919  normal  0.246717 
 
 
-
 
NC_013162  Coch_1405  rod shape-determining protein MreD  34.73 
 
 		 168 aa  90.5  1e-17  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.575841  n/a   
 
 
-
 
NC_009441  Fjoh_1456  hypothetical protein  35.17 
 
 		 168 aa  82.8  0.000000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_00575  putative transmembrane protein  34.36 
 
 		 167 aa  80.9  0.000000000000009  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.477275  n/a   
 
 
-
 
NC_013730  Slin_5927  hypothetical protein  35.37 
 
 		 168 aa  78.2  0.00000000000005  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010830  Aasi_1508  hypothetical protein  27.38 
 
 		 185 aa  59.7  0.00000002  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  1 
 
 
-
 
NC_002950  PG1394  hypothetical protein  29.37 
 
 		 172 aa  47.8  0.00007  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.0587258 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>