Gene Slin_5927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5927 
Symbol 
ID8729708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7182524 
End bp7183030 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content45% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003390688 
Protein GI284040758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTAC GCGAAATACT GTCTACGTCA TTTTTGTTTC TGTTGTACCT GGTGCTTCAG 
ATACTGTTGG CGCGGAATCT GGTTCTGTTC GATTATGCTT TCTGTTTTAT CTACATAGCC
TGTATTCTGC TCATGCCAAA TGAGATTGGC CTGACATGGT TGTTGCTCCT TGCATTCGTG
ACGGGAATTA TTGTCGATAT GTTTTACAAC ACATTAGGCA TGCATGCAGC AGCAACGGTA
CTAATGGCCT ATTGCAGACC GCTGGTAGTA CGTTCTCAAA TTGACGTACC GGGTCTGGAG
ACACGCATCG CGTTCTCGCT GCGTTCATTG GGCGTCAGTG CCTTCTTTCG CTATATATTT
GTATTGACGC TTGTACACCA TACGGCTCTA TTTTTCATTG AAGCCAGTAG CCTGACCCTG
ATTATTCCAA CCCTTATTCG GGTAATTGCC AGTACGTTGC TTACGACGGT GAGTATCGTA
TTGATTCAGT TCTTTACCAG AAATTAA
 
Protein sequence
MTLREILSTS FLFLLYLVLQ ILLARNLVLF DYAFCFIYIA CILLMPNEIG LTWLLLLAFV 
TGIIVDMFYN TLGMHAAATV LMAYCRPLVV RSQIDVPGLE TRIAFSLRSL GVSAFFRYIF
VLTLVHHTAL FFIEASSLTL IIPTLIRVIA STLLTTVSIV LIQFFTRN