| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1405 |
|---|
| Symbol | |
|---|
| ID | 8367837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1647744 |
|---|
| End bp | 1648250 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 644983833 |
|---|
| Product | rod shape-determining protein MreD |
|---|
| Protein accession | YP_003141512 |
|---|
| Protein GI | 256820233 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03426] rod shape-determining protein MreD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.575841 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCACC CAGTAGTAAG AAATGTATAT TTATTTGTAT TCTTAGTGTT GTTGCAGGTA
CTCATCTTCA ACAATGTGGA GTATTGGGGC TATGTAAACC CAATGGTTTA CATAGTGTTT
ATACTGCTAT TGCCCTATCG TGAAAACAGG ACACCTTCAT TGGTAGCGGC ATTCTTAATA
GGGTTGTGTA TAGACATTTT TTCTAATACG GGAGGGTTGC ACGCTGCTAG TAGTGTACTC
ATAGCTTATT TGCGTAATCC GATACTACTA ACGGTATTTG GCAAGAATTT TGAGTATCAA
GAATTGGATT TGCTCGCTTA TCCGTTTTCC AAGATTTTTA GCTATACAAC CTTGATGGTG
GTAGTGCATC ACACACTGTT TTATTTCTTA GAAGTCTTTA ACTTCAATCA CTTGTTTCTT
ACATTAGCAA AGATTGTAGG AGCATCTATC TTCACTATCA TCGTTTGTTT GCTATTCATC
TATCTGTTTA GTAAAAATAA GAAATGA
|
|---|
| Protein sequence | MSHPVVRNVY LFVFLVLLQV LIFNNVEYWG YVNPMVYIVF ILLLPYRENR TPSLVAAFLI
GLCIDIFSNT GGLHAASSVL IAYLRNPILL TVFGKNFEYQ ELDLLAYPFS KIFSYTTLMV
VVHHTLFYFL EVFNFNHLFL TLAKIVGASI FTIIVCLLFI YLFSKNKK
|
|---|
| |