10 homologs were found in PanDaTox collection
for query gene Coch_1405 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013162  Coch_1405  rod shape-determining protein MreD  100 
 
 		 168 aa  332  1e-90  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.575841  n/a   
 
 
-
 
NC_014230  CA2559_00575  putative transmembrane protein  40.28 
 
 		 167 aa  118  3.9999999999999996e-26  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.477275  n/a   
 
 
-
 
NC_009441  Fjoh_1456  hypothetical protein  38.24 
 
 		 168 aa  104  6e-22  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_3830  conserved hypothetical protein, membrane  37.75 
 
 		 167 aa  95.9  2e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.681919  normal  0.246717 
 
 
-
 
NC_008255  CHU_3306  hypothetical protein  28.85 
 
 		 173 aa  69.3  0.00000000002  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_0806  rod shape-determining protein MreD  31.72 
 
 		 171 aa  65.5  0.0000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  1  normal  0.785243 
 
 
-
 
NC_013730  Slin_5927  hypothetical protein  29.52 
 
 		 168 aa  65.9  0.0000000003  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_0192  rod shape-determining protein MreD  33.11 
 
 		 169 aa  63.5  0.000000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002950  PG1394  hypothetical protein  31.16 
 
 		 172 aa  57.8  0.00000007  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.0587258 
 
 
-
 
NC_010830  Aasi_1508  hypothetical protein  30.22 
 
 		 185 aa  51.2  0.000007  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  1 
 
 
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