Gene Phep_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0806 
Symbol 
ID8251895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp954811 
End bp955326 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content41% 
IMG OID644934456 
Productrod shape-determining protein MreD 
Protein accessionYP_003091090 
Protein GI255530718 
COG category 
COG ID 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.785243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGTA AATTAGTATT GGTAAACATA GTCAGGTGGT TTGTACTCCT TTTAATTCAG 
ATCCTGTTGC TGAGGAACCT GAGCTTTTAC AACATCGCTA CACCCTTTGT ATACATCCTG
TTTTTATTAT TGCTGCCCTT TGGTATCCCT AACCTCCTGC TGTACCTGAT TGCCTTTATA
ACCGGCCTTG CACTGGATGC TTTTTACGAT ACCCTTGGTG TTCATACTGC TGCCTGCATA
GCTCTGGCCT TTGTACGCAT CCTGTTCATA TCAGTAACCG TAAACCGAGA TGGCTTTGAT
GAGCCTGAAC CAACTTTAGG TAACATGGGC TTTAAATGGT TTATCATCTA TGCCCTGCTC
TGCACTTTTT CCCACCACCT GGTGCTGTTC TTTTTAGAAA CATTCAGACT GGCAGAGTTC
TCTTACACCT TGATCAGGTG CTTGTTTAGC AGTATATTTA CCTTGTTTAG TGTTGTATTG
ATAGAATTCA TATTCTATAA CAGAAAGATG CGCTGA
 
Protein sequence
MNSKLVLVNI VRWFVLLLIQ ILLLRNLSFY NIATPFVYIL FLLLLPFGIP NLLLYLIAFI 
TGLALDAFYD TLGVHTAACI ALAFVRILFI SVTVNRDGFD EPEPTLGNMG FKWFIIYALL
CTFSHHLVLF FLETFRLAEF SYTLIRCLFS SIFTLFSVVL IEFIFYNRKM R