10 homologs were found in PanDaTox collection
for query gene Dd1591_3407 on replicon NC_012912
Organism: Dickeya zeae Ech1591



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_3407  Xylose isomerase domain protein TIM barrel  100 
 
 
275 aa  564  1e-160  Dickeya zeae Ech1591  Bacteria  normal  0.0945287  n/a   
 
 
-
 
NC_008709  Ping_0452  xylose isomerase domain-containing protein  35.32 
 
 
271 aa  166  2.9999999999999998e-40  Psychromonas ingrahamii 37  Bacteria  normal  hitchhiker  0.00563474 
 
 
-
 
NC_013757  Gobs_4309  Xylose isomerase domain protein TIM barrel  35.1 
 
 
271 aa  153  2.9999999999999998e-36  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.046586  n/a   
 
 
-
 
NC_009430  Rsph17025_4043  hypothetical protein  33.2 
 
 
284 aa  116  3.9999999999999997e-25  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.587749  normal  0.406435 
 
 
-
 
NC_014150  Bmur_1477  Xylose isomerase domain protein TIM barrel  32.38 
 
 
273 aa  105  8e-22  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_3631  Xylose isomerase domain protein TIM barrel  22.22 
 
 
275 aa  56.6  0.0000004  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.9121  n/a   
 
 
-
 
NC_013525  Tter_0542  Xylose isomerase domain protein TIM barrel  24.38 
 
 
250 aa  49.3  0.00007  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012034  Athe_2335  Xylose isomerase domain protein TIM barrel  23.43 
 
 
271 aa  47.4  0.0003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_4045  xylose isomerase domain-containing protein  28.03 
 
 
283 aa  47  0.0004  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1112  Xylose isomerase domain protein TIM barrel  25.64 
 
 
259 aa  44.3  0.002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>