Gene Tter_0542 details

Gene Information

• Locus tag: Tter_0542
• ID: 8645007
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobaculum terrenum ATCC BAA-798
• Kingdom: Bacteria
• Replicon accession: NC_013525
• Strand: +
• Start bp: 600883
• End bp: 601635
• Gene Length: 753 bp
• Protein Length: 250 aa
• Translation table: 11
• GC content: 53%
• Product: Xylose isomerase domain protein TIM barrel
• Protein accession: YP_003322282
• Protein GI: 269925659

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTTATAG GAGCTCGTCA GGATTGCGTA CTAGGTGATA CTCTGGAAGA TCGCATGAGG 
ATACTAAAGG CCCTGGGATA CGACTTCGTT GAGCTGGCGC TCACTCGTTC GGAGATAGCA 
GGGCTGGATG CTCATTCCGC CGACTACTAC AAGAACATCG TGGAAAGTAC CGGCTTACCT 
ATACTCTCCA CCAGCATGGG ACATTTTGGG CATTTCGCAT CCCTCAACGA TGAGGAAAGA 
GCAGAGATAG TATCGCATGT GGACAAGCTT ATAACCTTCA CTCATGACAT AGGTGCTGAT 
GCTATACTGC TGGCCACACA GGAAGAGAGC CTGAAAGTGA GCGAGTACCT AAGTATCTAC 
AGGCAGCATA TTTTACCGCT GGCGGACAAG GCTTTGGACC TGGGAGTAAC CTTGGCCCTA 
GAGCACGTCA ACTGGTACAA GCCCTGGGCT CTAGCTGAGC TAGTGAAGGG ACTCAATCAT 
CCAGCGGTTG GCATCTACTT TGACATGGGC AACTGCCTAT ACGTGGGCGA GAACCCAAAG 
GAACAGGCCA AAATATGCGC TCCCTACACA GCGCATCTAC ATATCAAAGG GGGACCTGTG 
GCGCCACTGG CTGCCATGCC GCTGGAGGAG ATCAAGAGCA TACTTGAGGC TGGAGGTTTC 
CATGGGAGGG GTTGTTTGGA GATCATGACG GTGGAGGGCA ACAGGCACCT ATCCGAGGCT 
ATGGGCTTGC TGAGGATGGC CGGGTACAAG TAG 

 

Protein sequence

MLIGARQDCV LGDTLEDRMR ILKALGYDFV ELALTRSEIA GLDAHSADYY KNIVESTGLP 
ILSTSMGHFG HFASLNDEER AEIVSHVDKL ITFTHDIGAD AILLATQEES LKVSEYLSIY 
RQHILPLADK ALDLGVTLAL EHVNWYKPWA LAELVKGLNH PAVGIYFDMG NCLYVGENPK 
EQAKICAPYT AHLHIKGGPV APLAAMPLEE IKSILEAGGF HGRGCLEIMT VEGNRHLSEA 
MGLLRMAGYK