Gene Athe_2335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2335 
Symbol 
ID7407754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2477013 
End bp2477828 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content36% 
IMG OID643716699 
ProductXylose isomerase domain protein TIM barrel 
Protein accessionYP_002574178 
Protein GI222530296 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAAAT TTATATTCTC AGCATTTGGA GATGAGATAT CAAGCAGTTT GGATGAACAA 
ATAGAGGTTT TGAAAAAACA TGGTATAGAG TATTTAGAAT TTCGGTCTGC AAATGGGAAA
AACATTGCAG ATTATACTGA AAATGAAGCA AAAGAAATTA TAGAAAAGTT GAAAGATAGT
GGTATAAAGG TTTCAGCAAT AGGGTCTCCA ATCGGCAAGG TTGATGTAAA CTGCGACTTT
GAAAAGTATC TTGAACTTTT CAAGTACATC CTCCATCTTG CGCACATCCT TGAGACAAAA
TACGTACGCA TCTTTTCATT TTATGTTCCA GATGGTGAAG AAGAAAAGTA TACAGATGTT
GTCATAGAAA GGCTTTTGAA GTTTACTGAA ATTGCCAGAA AAGAAAATCT TGTTCTTCTT
CACGAAAATG AAAAAGAGAT TTATGGAAGC AATGCTGAAA GGTGTTTTAA AATCCTCTCT
GAGATCAACT CACCTAATTT GAGAGCAACA TTTGACCCGG CCAATTTTGT TCAGTGCAAA
GTAGAGGTCT ATCCTCATGC ATTTGAGCTT TTAAAGGATT ATATTGAGTA TGTACACATA
AAAGACGCAA AATTTTCAGA TGGAAGTGTT ACCGTTGCGG GCGAGGGTGA CGGAAGAATA
AAAGATGTGA TAGAAGCACT AAAGATGATA GACTTTTGTG GTTTTTTGTC GATTGAACCT
CATCTTAACA ATAACCTTCC TGGTGGTGGA CCTGAAAACT TTGCGAGGGC TTATAGAGCA
ATTAAAAAGA TCATCGATGA GGAAGGAGAG ATTTAA
 
Protein sequence
MYKFIFSAFG DEISSSLDEQ IEVLKKHGIE YLEFRSANGK NIADYTENEA KEIIEKLKDS 
GIKVSAIGSP IGKVDVNCDF EKYLELFKYI LHLAHILETK YVRIFSFYVP DGEEEKYTDV
VIERLLKFTE IARKENLVLL HENEKEIYGS NAERCFKILS EINSPNLRAT FDPANFVQCK
VEVYPHAFEL LKDYIEYVHI KDAKFSDGSV TVAGEGDGRI KDVIEALKMI DFCGFLSIEP
HLNNNLPGGG PENFARAYRA IKKIIDEEGE I