Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4045 |
Symbol | |
ID | 5091538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4825893 |
End bp | 4826744 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644743464 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001196372 |
Protein GI | 146301781 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA AAATAGGCGC TTCACTCCTA TCCTGGACAA CTCCAAACTG GACTCCGGAA TCAGGACATT ATGCCATAAA GGAAACTGCA AAAAATGGCT TTGATCTGAT TGAAATTCTT CTGCCTTCTA ATATGGAATT TGATGCGACA ACGGTAAAAA AACAACTTCA GGAAAATAAT CTTGATGCTG TATGCTCGTT AAATCTTCCT AAAGAAGCGC ATATTCCATT TTATCCTAAG GAAGCTTTGA CACTTATCTT CAAAGCTTTG GATAAAACTG CTCAATTAGA AACCACTTTT TTAGGAGGCG TTCTGCACAG CGGAATTGGT GTTTTTACCG GAAATCCTGT TACAAATCAG GAAAAGGAAA TTATTATAAA TGTTTTGGGT GAAGCCGCTC TTTATGCTGC TAAACTTGGC ATTACGATTG GAATTGAACC AATAAACCGT TATGAAAGCT ATGTGTGCAA TACAGCATCA AATGTATTGG AAATTATCAA TAGAATTAAT GCTGATAATC TTGCTGTTCA TTTGGACACT TTTCATATGA ATGTAGAAGA AAACAACTTT TATGATCCTA TAATTAAAGC GGGGAAAAAA CTAAAACATT TTCATATTAC CGAAAGTAAC CGCGGCATGC CCGGCGAAGG AACCGTAAAT TGGGATGAAC TTTTTAAAGC TTTAAAAGCC ATAAACTTTG AAGGAAATCT GGTATTAGAA AACTTTTCTT CATCAATTCC CGGAATGCAG CAAGCGGTTT CTTTATGGCA GACTTCACCA CATAATGCCG AAGAACTAGC CGTAGGCAGT TTAAATTTTA TCAAACAAAA AGTTTTTGAA TATCAAACAT AA
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Protein sequence | MKIKIGASLL SWTTPNWTPE SGHYAIKETA KNGFDLIEIL LPSNMEFDAT TVKKQLQENN LDAVCSLNLP KEAHIPFYPK EALTLIFKAL DKTAQLETTF LGGVLHSGIG VFTGNPVTNQ EKEIIINVLG EAALYAAKLG ITIGIEPINR YESYVCNTAS NVLEIINRIN ADNLAVHLDT FHMNVEENNF YDPIIKAGKK LKHFHITESN RGMPGEGTVN WDELFKALKA INFEGNLVLE NFSSSIPGMQ QAVSLWQTSP HNAEELAVGS LNFIKQKVFE YQT
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