| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_3407 |
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| Symbol | |
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| ID | 8119943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | + |
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| Start bp | 3877466 |
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| End bp | 3878293 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644853780 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003005701 |
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| Protein GI | 251790980 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0945287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTA AGGGGCTAAC AATTTCAAAT ATTGCATGGA ACAATGATGA AAATGATGCC
GTGCTTAACA TCCTAAAAAA ACATGGTATT AATGCTCTTG AAGTAGCTCC TGCAAAAGTT
GTTAATAATA TCCAAGACTT TTCTGATGAA GAAGTTTTTT TATACAAAAA CAAAATGAAT
GATGCTGGTA TTGTTATCAG CTCGATGCAA GCATTGCTGT TTGGTGGGCC CGCAGGTAGT
ATTTTTGGTA ATAAAGAGGA AAGCGATGCT ATTCAGTTTC ATCTGAGTAA AATTATCCAT
ATGGCAGGTC TCCTTGGTGC TGAAAGATTA GTTTTTGGCT CACCTAAAAA TAGATTAAAA
AATCATATTT CATTTAATCA GGCAGTAGAA ATTGCGGCAA ATTTCTTCCG ACCCTTAGCA
GTCCAAGCTC ATAATGTTGG CACCATGATC TGTATTGAAC CTAATCCTGT ATACTATGGA
TGTGATTTTG TTACCGACTC AGAAGAAGCA ATTGAGCTTG TAAATGAAAT TAATAAACCA
GGATTTGGAG TTCACTTAGA TCTTGCCGGT CTAAGATTAT CAAAGGAAGA TGTCTATAAG
AGAATCTCCT TATTGAATAC GGGAATTGCT CATTTTCATA TTAGTGAAAA AGATCTGGCA
CCAATTGGTA TTGATATTGA AGCCCATAAA TTAGCGTGCG AAGGTTTTAA AAATGCATCA
TATCAAGGGT GGTTATCAAT TGAGATGAAA AGATCAGAAA CTCCATTGCA AGATATTGAT
GCCAGTATCT CTTTGGTAAA AGAAATGTAC AGGTCCATAT TATGCTAA
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| Protein sequence | MKIKGLTISN IAWNNDENDA VLNILKKHGI NALEVAPAKV VNNIQDFSDE EVFLYKNKMN
DAGIVISSMQ ALLFGGPAGS IFGNKEESDA IQFHLSKIIH MAGLLGAERL VFGSPKNRLK
NHISFNQAVE IAANFFRPLA VQAHNVGTMI CIEPNPVYYG CDFVTDSEEA IELVNEINKP
GFGVHLDLAG LRLSKEDVYK RISLLNTGIA HFHISEKDLA PIGIDIEAHK LACEGFKNAS
YQGWLSIEMK RSETPLQDID ASISLVKEMY RSILC
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