5 homologs were found in PanDaTox collection
for query gene Cpin_3974 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013132  Cpin_3974  hypothetical protein  100 
 
 
186 aa  378  1e-104  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0326634  normal  0.332513 
 
 
-
 
NC_013061  Phep_1683  hypothetical protein  28.74 
 
 
165 aa  50.1  0.00002  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.942243 
 
 
-
 
NC_013061  Phep_2650  hypothetical protein  30.53 
 
 
1194 aa  49.7  0.00003  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2185  beta and gamma crystallin  30.85 
 
 
483 aa  45.1  0.0006  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.421381  hitchhiker  0.000898498 
 
 
-
 
NC_008255  CHU_2105  xylanase  24.79 
 
 
674 aa  42  0.005  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
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