Gene Cpin_3974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3974 
Symbol 
ID8360147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand- 
Start bp4939090 
End bp4939650 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content46% 
IMG OID644966148 
Producthypothetical protein 
Protein accessionYP_003123637 
Protein GI256422984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0326634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.332513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA TCAGTAAAAT AATTACAGCA AGTGCTGTGG GTGTGTCATT CCTTTTTTCA 
GGAATGGCAC ACGCGCAGTC AGCGCTGATC CCCAAGATCG AACGTCAGGT CACTGCCAGC 
GGAGGAAAAG CCGTACTGGT AGGATTAACT GACATGGACA ACAAGTTATT CGAATACGAA 
ATTGACTGTA CAATCGGCGA TATCATGGTG AAACAGCTCA GCTATCCGGA CTATGCCGTC 
GTACAACAAG GATATCAGCA AGGTCCGTTG GTGCTGCCAA AGCTGAATGC AGATGAAATG 
CTGGTGTACC CCAACCCTAC TGATAAAGAG ATCACCATTA AGTATAACCT GGACCCGGGA 
GTCAAAAGAG TGGACGTGCG CGTCATCAAC CTCTATGGCC GTATGGTCTT CTCAGAAGCT 
AATACACCGC TGGCCAGCTA CGGTACCATG TATGAGTACA AACTGGATGT ACAGGATTAT 
GTACCAGGCG TTTACCTGGT AACGATCATC TTCGACACAG GTATCAAGGT GACAAGAAAG 
TTCATAAAAT TCGATCAGTA G
 
Protein sequence
MKTISKIITA SAVGVSFLFS GMAHAQSALI PKIERQVTAS GGKAVLVGLT DMDNKLFEYE 
IDCTIGDIMV KQLSYPDYAV VQQGYQQGPL VLPKLNADEM LVYPNPTDKE ITIKYNLDPG 
VKRVDVRVIN LYGRMVFSEA NTPLASYGTM YEYKLDVQDY VPGVYLVTII FDTGIKVTRK 
FIKFDQ