6 homologs were found in PanDaTox collection
for query gene Coch_1123 on replicon NC_013162
Organism: Capnocytophaga ochracea DSM 7271



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013162  Coch_1123  hypothetical protein  100 
 
 
278 aa  572  1.0000000000000001e-162  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_4454  hypothetical protein  29.63 
 
 
280 aa  121  1.9999999999999998e-26  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.000000000148618  normal  0.54702 
 
 
-
 
NC_008577  Shewana3_2086  beta-xylosidase-like protein  25.38 
 
 
1121 aa  44.3  0.002  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00280414  decreased coverage  0.0000000469917 
 
 
-
 
NC_010814  Glov_2914  cell surface receptor IPT/TIG domain protein  23.32 
 
 
1035 aa  44.7  0.002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1999  glycoside hydrolase family protein  25.38 
 
 
1121 aa  43.1  0.005  Shewanella sp. MR-4  Bacteria  unclonable  0.000101187  decreased coverage  0.0000000170847 
 
 
-
 
NC_008392  Bamb_6366  putative transmembrane protein  23.33 
 
 
739 aa  42.4  0.009  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
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