| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1123 |
|---|
| Symbol | |
|---|
| ID | 8367545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 1332525 |
|---|
| End bp | 1333361 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644983551 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003141239 |
|---|
| Protein GI | 256819960 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT ATGTATTATA TATCAGTTTT ATGGTGAGTC TGACAGCCCT TACCAGCTGT
TTCCAAGACT TAGACCAAGA CCCTGCGTTT GATTATCCCA AGCAACCTCC TATCTTAGAC
TATGTAAAGC CTAAATTAGC TTTTACTTTT GAAGATAATA GTGAGGATAT GAGTGTGTAT
AAAGCAACCA CTCAGGTAGT AGGAAATGCT TCCTATACAC AAGGAAAAGT AAAAAAAGCT
TATCAAGGAG CTGATAATAG CTATATACTT ATCACACCTC CTACTACCCC ACTTAATGGT
GGTAAATCGT TGCACGATAT ATTGAGTAAC TTAGGTAGTT TTTCTATCGC TTTTTGGATA
AATGCCGAAA AACCTACTAA GGCAATAGGA TTATTTTCTT TAACCAATAA CAAAGGCTTT
TGGAGTTATA TAGACCTATT TATGGAGCCA GGTAATTCAA CTCAAACCAA TGGACGTTTT
AAACTGCATT TGAGCAACGG TACCGAAAAT GGTTGGGTAG ATAAGGTAAT CCCAGAAACA
TTAGGCAAAT GGGTACATTT GGTCTTTCGT TATGATGCTA CCACAGGTAA GGTTACTATT
TTTCGGAATG GAGCAGAGGT ACATTCGCAA GAGTTTAAGA CTTTGGGAGG CATAGCGTGC
CCCAACTTAG GTACTCTTGT AGTAGGGACG CTTCCTTTTC AAACTACTCC TCCGCTCACC
ACTGGGGCAG GTGCACAAGG ATGGGCAGGA TTCTACAAAG GTCAGTTAGA CCAGTTTTAT
TTCTTTAATG AACCTATTAA TGATGTTCAA ATAAAAACAT TAGCGAGTGA AAAATAG
|
|---|
| Protein sequence | MKKYVLYISF MVSLTALTSC FQDLDQDPAF DYPKQPPILD YVKPKLAFTF EDNSEDMSVY
KATTQVVGNA SYTQGKVKKA YQGADNSYIL ITPPTTPLNG GKSLHDILSN LGSFSIAFWI
NAEKPTKAIG LFSLTNNKGF WSYIDLFMEP GNSTQTNGRF KLHLSNGTEN GWVDKVIPET
LGKWVHLVFR YDATTGKVTI FRNGAEVHSQ EFKTLGGIAC PNLGTLVVGT LPFQTTPPLT
TGAGAQGWAG FYKGQLDQFY FFNEPINDVQ IKTLASEK
|
|---|
| |