9 homologs were found in PanDaTox collection
for query gene Dfer_4454 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_4454  hypothetical protein  100 
 
 
280 aa  570  1.0000000000000001e-162  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.000000000148618  normal  0.54702 
 
 
-
 
NC_013162  Coch_1123  hypothetical protein  29.63 
 
 
278 aa  121  1.9999999999999998e-26  Capnocytophaga ochracea DSM 7271  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3635  hypothetical protein  25.33 
 
 
307 aa  73.6  0.000000000004  Pedobacter heparinus DSM 2366  Bacteria  normal  0.322617  normal 
 
 
-
 
NC_009486  Tpet_0638  hypothetical protein  25.47 
 
 
250 aa  52  0.00001  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.0000000613219  n/a   
 
 
-
 
NC_007517  Gmet_2469  fibronectin, type III  26.81 
 
 
3507 aa  47.4  0.0003  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0663  hypothetical protein  24.9 
 
 
250 aa  45.4  0.001  Thermotoga sp. RQ2  Bacteria  normal  0.351278  n/a   
 
 
-
 
NC_009972  Haur_1999  LamG domain-containing protein  30.11 
 
 
3907 aa  43.9  0.003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_2914  cell surface receptor IPT/TIG domain protein  26.42 
 
 
1035 aa  43.9  0.003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_0640  hypothetical protein  24.9 
 
 
250 aa  42.4  0.01  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00000266751  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>