14 homologs were found in PanDaTox collection
for query gene CNM00310 on replicon NC_006682
Organism: Cryptococcus neoformans var. neoformans JEC21



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_006682  CNM00310  conserved hypothetical protein  100 
 
 
382 aa  794    Cryptococcus neoformans var. neoformans JEC21  Eukaryota  decreased coverage  0.00875379  n/a   
 
 
-
 
BN001307  ANIA_01472  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_8G04630)  30.3 
 
 
395 aa  123  6e-27  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00510243  normal  0.213682 
 
 
-
 
BN001304  ANIA_07797  C4-dicarboxylate transporter/malic acid transport protein, putative (AFU_orthologue; AFUA_2G17660)  30 
 
 
375 aa  116  5e-25  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.0796042 
 
 
-
 
BN001306  ANIA_09133  malate permease (Eurofung)  23.93 
 
 
361 aa  62.4  0.00000001  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.0625395  normal  0.622615 
 
 
-
 
NC_011206  Lferr_0042  C4-dicarboxylate transporter/malic acid transport protein  25.2 
 
 
402 aa  58.2  0.0000002  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.120445  normal 
 
 
-
 
NC_011761  AFE_0041  C4-dicarboxylate transporter/malic acid transport protein  25.2 
 
 
385 aa  57.8  0.0000003  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.299856  n/a   
 
 
-
 
NC_004578  PSPTO_4613  C4-dicarboxylate transporter/malic acid transport protein  25.4 
 
 
389 aa  56.2  0.0000009  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.522364  n/a   
 
 
-
 
NC_007005  Psyr_1479  C4-dicarboxylate transporter/malic acid transport protein  25.4 
 
 
389 aa  56.2  0.0000009  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.805909  normal 
 
 
-
 
NC_006670  CNA05110  sulfite transporter, putative  24.89 
 
 
517 aa  55.8  0.000001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_007650  BTH_II1616  C4-dicarboxylate transporter/malic acid transport protein, putative  24.12 
 
 
381 aa  56.2  0.000001  Burkholderia thailandensis E264  Bacteria  normal  0.195431  n/a   
 
 
-
 
NC_010552  BamMC406_4643  C4-dicarboxylate transporter/malic acid transport protein  20.41 
 
 
383 aa  47.4  0.0005  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1664  C4-dicarboxylate transporter/malic acid transport protein  20.59 
 
 
383 aa  45.4  0.002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.537362  normal  0.0255572 
 
 
-
 
NC_010581  Bind_2472  C4-dicarboxylate transporter/malic acid transport protein  22.52 
 
 
419 aa  45.4  0.002  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_3232  C4-dicarboxylate transporter/malic acid transport protein  21.23 
 
 
382 aa  43.1  0.007  Methylocella silvestris BL2  Bacteria  n/a    hitchhiker  0.00415956 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>