| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNM00310 |
|---|
| Symbol | |
|---|
| ID | 3255099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_006682 |
|---|
| Strand | - |
|---|
| Start bp | 79669 |
|---|
| End bp | 81297 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | |
|---|
| GC content | 49% |
|---|
| IMG OID | 638254190 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_568376 |
|---|
| Protein GI | 58261932 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1275] Tellurite resistance protein and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00875379 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTC GACAATCAAG GTCACCAGAG CGAACGCATA CCAACGAACA TCATCATAAT
CATTCCGCAC TTGAAAAAAG TAAAGGTCAT GACCTTGATA CACAAAAGGT CAATGATCCG
AACTACAAGC CGAGGGGATG GATAGCCAGA AGTGAATTCT GGACTTGGAA GTAAGCCATA
CGTCCCCTCG CCCCTTTCCG TCACTGCCCA CCCCAGTGAT CGCTTGGAAG GAAGGATCCA
GTGCTGACTG AAAAAAAAAA ACGGTATCAG CTGCTTCACA GTCAACATGG GTACAGGAGC
CGTCGCCATC CTCGTAGGCG GCGTCCAATT TCCGTTCAAC GGCCAACGCG AGATCGGTAC
CGTCTTCTTC ATGATCGACC TCGTTGTCTT TTTCATCAAC GTCATCGGCG TGGCTTGCCG
TGCAGTCTTC CACTGGGCAA ATTTCAAAGA TTCCTTCTTC GACCATTCGG ATGGGACGTA
CATCCCCTGT ATCCTTTTGG CGGTAGCGAC GCTCTTTGTC GGGATTATGG ACTATGCAGT
GCCTCACTGT GGGTTCTGGT TGACGAGGGC GATGTACGTG GTGTACTGGA TGTATATAGG
GTGTAGTCTG GCGATCGCAT TGATCCTCGA ATGTACATTG CGGGGACATC AGCGTAAGCT
GGATACTATA ACCCCTGCAG ACTGTTTGCT GTTCTTCGTG AGTCGGATCA AATACAGCCT
ATAATTTTGA CACCTCTTCA AAACTGAAAA ATAAAGCCTC ACTATAGCCG CTCATGCTTT
CCGGAACCAT TGGCAGTGCG CTTGCCAACA AACTGCCCCT CCAGGAAGCC GGCTATGTCA
TCATCATCAG CTACTGGCTA CAAGGAATGG GGATGATGCT CTCCCTATTG AAATGCTCCG
TGTGGATGGC GAGGAACATG CTTCGCGTCA ACCCACCGCC CTCTTCCCTT CCCGGGTACT
TGATCGCTGT CGGGCCTCCA GGATTTACTG CCTTTGGTGA GTTCAGTTTC GGTCAAGATA
ATATTTATCA TCATCATCAT GCTGACCCTA TTCGTTCTAG CGTTCTTAAA TCTCGGTAAT
CTCGCGGTCG ACGCGTTTCC GGCTAGCAAC ATTCTTGCAT CTTCAAACGG AGGCCAGATA
TTCCAAGTCG TCAGTGTATG GTACAGCTTT ACCCTCCTCG TACGTCATGC TGTTTCACTT
GTTTTATTTG AATACCGATG AGAAGGATGA ATCTCAACAG CAAAGATGTC TAGGGTCTTG
CTCTCTATAT CCTTTTCTCC ACCCTGACCA TCTGGGTCTT TGGGCAGGCA CTCGATCGTA
AAGTCGAATG GTCGATGGGG TGGTGGAGTT TTACTTTTCC CCTGACTGGC TTCTTCATGG
CTACTGCCCA ATTAGGCGCT CAACTACCAT CCGAGACGTT CAAGTAAGCA TCCCATCGCC
TTCTCTCTAT CCATAATATA TATATATCAT CAGGAAACAA AGCCTGACGT TTAGCTCCTT
CAATAGGGTC ATCCAAGTAG TCGGATGTCT GGCCGTCACA GTAGCCTGGT TCATCAACTT
TTACATGACC TTGTACAGCA TCTTCATCTC ACGATCCCTC GGAATGCCCA CATTGTCGAA
AAAGGATGA
|
|---|
| Protein sequence | MSARQSRSPE RTHTNEHHHN HSALEKSKGH DLDTQKVNDP NYKPRGWIAR SEFWTWNCFT
VNMGTGAVAI LVGGVQFPFN GQREIGTVFF MIDLVVFFIN VIGVACRAVF HWANFKDSFF
DHSDGTYIPC ILLAVATLFV GIMDYAVPHC GFWLTRAMYV VYWMYIGCSL AIALILECTL
RGHQRKLDTI TPADCLLFFP LMLSGTIGSA LANKLPLQEA GYVIIISYWL QGMGMMLSLL
KCSVWMARNM LRVNPPPSSL PGYLIAVGPP GFTAFAFLNL GNLAVDAFPA SNILASSNGG
QIFQVVSVCR MVDGVVEFYF SPDWLLHGYC PIRRSTTIRD VQGHPSSRMS GRHSSLVHQL
LHDLVQHLHL TIPRNAHIVE KG
|
|---|
| |