5 homologs were found in PanDaTox collection
for query gene CNF01160 on replicon NC_006691
Organism: Cryptococcus neoformans var. neoformans JEC21



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_006691  CNF01160  positive transcription elongation factor, putative  100 
 
 
349 aa  716    Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001303  ANIA_04861  transcription elongation factor S-II (AFU_orthologue; AFUA_3G07670)  31.91 
 
 
304 aa  145  1e-33  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal  0.776551 
 
 
-
 
NC_009043  PICST_57286  predicted protein  30.57 
 
 
294 aa  144  2e-33  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.271408  normal 
 
 
-
 
NC_009364  OSTLU_5818  predicted protein  41.83 
 
 
173 aa  105  8e-22  Ostreococcus lucimarinus CCE9901  Eukaryota  hitchhiker  0.00487195  normal  0.526788 
 
 
-
 
NC_011678  PHATRDRAFT_36634  predicted protein  35.77 
 
 
323 aa  63.9  0.000000003  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>