| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_57286 |
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| Symbol | |
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| ID | 4838018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009043 |
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| Strand | - |
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| Start bp | 572406 |
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| End bp | 573290 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389333 |
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| Product | predicted protein |
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| Protein accession | XP_001383742 |
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| Protein GI | 150864771 |
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| COG category | [K] Transcription |
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| COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
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| TIGRFAM ID | [TIGR01385] transcription elongation factor S-II |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.271408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTA AAGAAATCAA GTCGACAGTG CTGAATCTCG ACAAAGCTTC AGACGATGCC
ACCATTTTGA AGCTCTTGAA CATCTTGAAT GATGGAGTCA AGCCCTCTGA AAAATTGTTG
AGGGAAACAA AGGTTGGTGT CGCTGTTAAC AAGTACAGAT CCCACAGCAA CAGCGACATC
AACTCGTTGG TCAAGAAGAT GATCCGCACA TGGAAGGAAT CTGTCCAGAA TGAGAAAAAC
AGCAAAAAGA AGACGGCCTC GCCTGTTTCA AATGGAAATG CTGCAAGTTC AGTCAAGGAA
GAAGTGAAAA GTGAGGCCGG TTCTACCAAT AGCAAGTTCC ACCAGGGACC CAGGAACCCC
AAGACTGATG GAGTAAACAC AACTTTGTAT GATAACAGTA CCAGAAATGC ATCTGTCAGC
GCACTTTATA CTGCTTTGGC TATTGAACGT GATGATCGTC TGTCGCATAT CTTGAGCGTG
GCCAGAGAAA TAGAGAGTGA AGTGTTCAAG TCCGAGTATC TGAATGTCAA CGACAACTAC
AGAAACAAGT TGAGAACTTT TACCATGAAT CTACGCAACA AAAAGAACCC GGAGTTGAGG
GAAAGATTGT TGTCTGGAGG AATCAAACCA GCAGAGTTCA TCAAGATGTC TCCTAACGAA
ATGGCTCCAG AGGCTTTGAA GAAGGAGATT GAAAAATTGC ACAAGAAGAA CTTGTTTGAT
GCCCAAGGTG CCACCGAAAA GAGAGCTGTT ACGGACAGAT TCACCTGTGG CAAGTGTAAG
CACAAGAAAG TGTCGTACTA CCAGATGCAA ACTAGGTCAG CAGATGAACC TTTGACTACG
TTCTGTACCT GTGAGAACTG TGGAAATAGG TGGAAGTTCT CATAG
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| Protein sequence | MDTKEIKSTV SNLDKASDDA TILKLLNILN DGVKPSEKLL RETKVGVAVN KYRSHSNSDI
NSLVKKMIRT WKESVQNEKN SKKKTASPVS NGNAASSVKE EVKSEAGSTN SKFHQGPRNP
KTDGVNTTLY DNSTRNASVS ALYTALAIER DDRSSHILSV AREIESEVFK SEYSNVNDNY
RNKLRTFTMN LRNKKNPELR ERLLSGGIKP AEFIKMSPNE MAPEALKKEI EKLHKKNLFD
AQGATEKRAV TDRFTCGKCK HKKVSYYQMQ TRSADEPLTT FCTCENCGNR WKFS
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