| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNF01160 |
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| Symbol | |
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| ID | 3258414 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006691 |
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| Strand | + |
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| Start bp | 349601 |
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| End bp | 351039 |
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| Gene Length | 1439 bp |
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| Protein Length | 349 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | 638257239 |
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| Product | positive transcription elongation factor, putative |
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| Protein accession | XP_571548 |
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| Protein GI | 58268784 |
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| COG category | [K] Transcription |
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| COG ID | [COG1594] DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS |
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| TIGRFAM ID | [TIGR01385] transcription elongation factor S-II |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGCCA CCACTCTTAC AGGGCACGTC AAGGAGCTCA ATGCTGCAAA CCAAGCGGGA
AAATCAGATG TGAGTGATGC CGTCGGCGTT GTATCGCCAA GGTGCTTGCG TCGTTCTTTC
GTAGGTCTGC TGCTGACTAG CATGATGATG ATTTATAGGA AGTTATCTCT CTGCTCAAGA
AACTTCAGGC TGAGGTTGTT CCTACAGAAG ATCTCCTTCG AGTATGTTTC CAATCGAAAG
TCAATGCGAA ATAAGCTAAA GCTCGCCCGA CTTGGTATTT CCACTTGTAG TCATCGAAAG
CTGGTGTCGC AGTCGGCAAG CTTCGTACCC ACGCCACACC ATCAGTCTCA AGTCTTGCCA
AGGAGATAGT TAAGAAGTGG AGAGATGCGG TCGAGGAGAC AAAGAAGAAG AGAAAAAGAG
CAGAAGGTGA TGAAGGAAAA GATGTAAAGA AGGAGAAGGA GGAAGGGAAC GGGAAACGAG
TCAAGGCGGA AAGTATGTGT GCACTGTCAC CAGCTGCAGA ATCAGGAAGT GATACTCATA
TTCATTTTGC AGCGGGGTCA TTAGCGGCGA CACCATCAGC TAGCACACCC GCCTCGGCCT
CTACACCCGA TGTCAAAGCG ACCTCCCCTC CTGTCCGTCA ACCTCTTTCA ACCATTGACT
CATCACGCAC TACGCCTCGA ACCGCCAAAA GCGATGGAGT GGCCGACAGC CTGAGAGCTG
ATTCGAGCGA AGGAGGCAGT GTAGATAGCG TGAGGGACAA GTGTGTGATC ATGATTTATG
ACGCATTGGC GTTGGATAGC ACGGCTGGTA TGTCTGGAAT TTCTTGCTCT GTTGCCGTGG
TGCTTTTACA CCTTGCTGTC GCCTTTCACA GTTGAACGAT TGAATGACTG ACGCAACGCA
AACTATAGAA ATAAAGATTT TGAAAGAGCG CGCCATTGGA ATTGAGCGCG CAGCGAATAA
AGCTATGAAC TTCTCAACAG GAAACGATTA TCGCGCTAGT AAGTTTGATT TGGAAGCGCC
CTAAAAGGGC AGCTGACTGA TAGTAAACAA GAAATGAGAT CACTATTCCT CAACTTGAAA
GACAAGGGTA ATCCCGCTTT GAGAAACGAG ATTGTCTTGG GCTACGTCAG CACCGAAAAA
GTCGCTAGCA TGTCCAAAGA TGTAAGTCCA CAGTCACCTT ACAGAGCTAG CACCAGGATG
CTCACATTCC ACAAAATCAG GAAATGGCCT CTGAAAGCGT TCGAATGCTA AAGGAGAAGA
TTGCGAGTGA CAACTTGTTC AAGGCCAAGG CTGTCGGAGT CACCCAAGCT GAGACAGACG
CGTTCAAGTG CGGACGGTGT CACCAGAGGA AATGTACTTA TTACCAGATG CAGACAAGAA
GCGCGGATGA ACCTATGACT GTGAGTCGAT ACCTTGCCCA TATGATAAGA TGGTACTAA
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| Protein sequence | MDATTLTGHV KELNAANQAG KSDEVISLLK KLQAEVVPTE DLLRSSKAGV AVGKLRTHAT
PSVSSLAKEI VKKWRDAVEE TKKKRKRAEG DEGKDVKKEK EEGNGKRVKA ESMCALSPAA
ESGSDTHIHF AAGSLAATPS ASTPASASTP DVKATSPPVR QPLSTIDSSR TTPRTAKSDG
VADSLRADSS EGGSVDSVRD KCVIMIYDAL ALDSTAERAI GIERAANKAM NFSTGNDYRA
KMRSLFLNLK DKGNPALRNE IVLGYVSTEK VASMSKDEMA SESVRMLKEK IASDNLFKAK
AVGVTQAETD AFKCGRCHQR KCTYYQMQTR SADEPMTVSR YLAHMIRWY
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