8 homologs were found in PanDaTox collection
for query gene Avi_8133 on replicon NC_011982
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011982  Avi_8133    100 
 
 		 1175 bp  2329    Agrobacterium vitis S4  Bacteria  normal  0.335379  n/a   
 
 
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NC_011984  Avi_9192  conjugal transfer protein TraB  79.14 
 
 		 1212 bp  91.7  4e-16  Agrobacterium vitis S4  Bacteria  normal  0.134775  n/a   
 
 
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NC_011981  Avi_7066  conjugal transfer protein TraB  81.44 
 
 		 1086 bp  85.7  0.00000000000003  Agrobacterium vitis S4  Bacteria  normal  0.524899  n/a   
 
 
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NC_009621  Smed_5391  conjugal transfer protein TraB  85.9 
 
 		 1164 bp  67.9  0.000000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.970188  normal  0.166771 
 
 
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NC_012853  Rleg_5512  conjugal transfer protein TraB  85.33 
 
 		 1155 bp  61.9  0.0000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.569309  normal  0.0492499 
 
 
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NC_007961  Nham_4542  conjugal transfer protein TraB  96.55 
 
 		 1137 bp  50.1  0.001  Nitrobacter hamburgensis X14  Bacteria  normal  0.325638  n/a   
 
 
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NC_011991  Avi_9597  conjugal transfer protein TraB  93.94 
 
 		 1143 bp  50.1  0.001  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
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NC_010682  Rpic_3361  alpha/beta hydrolase fold  100 
 
 		 1023 bp  48.1  0.006  Ralstonia pickettii 12J  Bacteria  normal  0.013073  normal  1 
 
 
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