Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4542 |
Symbol | |
ID | 4025310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007961 |
Strand | + |
Start bp | 3995 |
End bp | 5131 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637965044 |
Product | conjugal transfer protein TraB |
Protein accession | YP_571952 |
Protein GI | 92109666 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.325638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGGCCG CCGCGATTGC CGTCGGTGCT GTGGGCTGGA GCGGCCATGT GCTCGCTTTG CCGCTCGCCT GCGCCTTCCC GACGTTGTGG GCCTTCGCGC CCTCGCGCTC GGCCTCGGCG GCGGTGAGCG CGGGCTATTT CCTGGCGGCC TCGCGCGGCC TGCCGCAGGG CGTCGTCAAT TTCTACGGCA GCGACTTCTC CGTCGGCATC GCTCTCTGGA TCGGCGCTGC CGCCGCCTTC GTCCTGGTCC ACACCGTGCT CTGGCAGAGG CAGCCGGGAT GGCGAGGGGC GGTTTCGTTC GGGATCGCTA CGGTCCTGAT GAGCCTGCCG CCGTTCGGCA TCGTGGGATG GGCTGAGCCG ATCGCGGCGG CCGGTGTGCT GTTTCCCGGT TGGGGATGGT GGGGACTGGC GGCAACCGCC GCCGTCCTCC CCACCATGAC GACCGGCAAG TGGCCGATCG CGGCGATCGT GGCGACGGGC TTCTGGGCCT GGTCCGCTGC ACACTGGATC GCGCCGTCTC CGCCGCAAGG CTGGACTGGT CTCGACACGC GGCTCGGGAG CGCGCTCGGC CGCCCGCCCG ACCTCGAACA AACCCGTGCG CTCTTTGAGC GCGTAAGCGA GGCAAGAGGC GCCGGCGCTC GCGTTGTCGT GCTGCCGGAG AGCGCGGCGG GGTTGTGGAC GCCGACCACC AGCGCCTTCT GGATCGATAG CCTCCGCGGC GCGGACGTCA CGGTGATCGC CGGCGCCGCG ATCGTCGAAC CGGATGGCTA CGACAACGTC ATGGTGGAGG CCGGCGACGG TCGCGCGCGC GTTCTCTACG GCGAGCGCAT GCCGGTCCCG GTCTCGATGT GGCAACCCTG GCTGGCTTGG ACCGGGCAGG GCGGCGGCGC CCGGGCCAGC TTCTTCGGCA ACCCTGTCGT CGAGGTGGCT GGCCGGCGGG TCGCGCCGCT GATCTGCTAC GAGGAGCTGC TCGTCTGGCC CGTCCTGCAG TCAATGTGGT ACGCGCCCGA CGTGGTCGTT GCGATCGGCA ACGACTGGTG GACCGCCGGC AGCAGCATCC TCGCCATTCA AAGAGCCAGC TGTGAGGCCT GGGCGCGCCT GTTCGCCCTG CCGCTTGTGC TCGCGTTCAA CACCTGA
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Protein sequence | MVAAAIAVGA VGWSGHVLAL PLACAFPTLW AFAPSRSASA AVSAGYFLAA SRGLPQGVVN FYGSDFSVGI ALWIGAAAAF VLVHTVLWQR QPGWRGAVSF GIATVLMSLP PFGIVGWAEP IAAAGVLFPG WGWWGLAATA AVLPTMTTGK WPIAAIVATG FWAWSAAHWI APSPPQGWTG LDTRLGSALG RPPDLEQTRA LFERVSEARG AGARVVVLPE SAAGLWTPTT SAFWIDSLRG ADVTVIAGAA IVEPDGYDNV MVEAGDGRAR VLYGERMPVP VSMWQPWLAW TGQGGGARAS FFGNPVVEVA GRRVAPLICY EELLVWPVLQ SMWYAPDVVV AIGNDWWTAG SSILAIQRAS CEAWARLFAL PLVLAFNT
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