| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9192 |
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| Symbol | traB |
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| ID | 7367730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011984 |
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| Strand | + |
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| Start bp | 149236 |
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| End bp | 150447 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643644375 |
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| Product | conjugal transfer protein TraB |
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| Protein accession | YP_002542672 |
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| Protein GI | 222083269 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.134775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGATCG CCCTGTCCGT CGCCAGCGGT TGGATCGGCT GGAGCGGAAA CGTGCTCACT
ATCCCGGTGG CGATGCTCTT TCCAGCACTC TGGGCACATT CAACATCCCG GACGACAGCG
GCCCTTGTTT CGGCAGGATA CTTCCTTGCC GCCTCGCGCG GCCTGCCGCT AGGCGTCGCG
AACTTCTACG CAGCGGATAT GTGGCCCGGC CTCCTGCTTT GGCTGGGGGC CTCGCTCTCC
TTCATCTTGG TGCATGCGGT GGCCTGGGCA AAGCAACCGA ACCTGAACCG GGCGGAAGGG
CAACCGGGAG AGAGGCGCCT GGCAAGGTGG GTCGCGGATA TCCCGCTTGC GGAAAAGGGG
CTGGCCATGC GCTATCTTGT GGCTTCGCTG CTGATGGCGC TGCCGCCGTT CGGTATCATG
GGGTGGGCGC ATCCACTGAC GGCGGCGGGC GTGCTGTTTC CGGGATGGGG ATGGTGGGGC
CTCGGCGCGA CCGCGTGTCT GCTGGTCATC ATGACCGGTC GAAGGTGGCA ACTCGCGGTC
GCAGTCCTGG GAGGACTTTA CGTCTGGTCC GCCACAACCT GGACGCCCCC GAAAGTACCA
GACAGATGGA CAGGCGTCGA TCTTCAGCAT GGCGAAAACC TCGGTCGCGA TAACTCCCTC
GACCATCACC GTGATCTGAT CGCAACGGTG CGTGCGGCGG CAGGACCGGG AACCCGTTTC
GTGGTTCTTC CCGAAAGCGC ACTCGGCTTC TGGACACCGA CCGTCGCGCA GCTCTGGCAG
CAGGGCTTGC GAGGCTCGAA CCTCATCGTA ATGGCTGGCG CAGCCGTCAT CGATGCCGGT
GGTTACGACA ACGTCATCGT GGCGATCTCG GCCGGTGAGG CACAGATCCT CTATCGCGAG
CGCATGCCGG TCCCGGTCTC CATGTGGCAG CCGTGGCGCA AGTGGACGGC GCAGGGCGGC
GGCGCTCGAG CGCACTTCTT CGCGAACCCG GTCGTGGATC TCGCGGGCAC GAGGATCGCG
CCGCTGATCT GCTACGAGCA ATTCGTCCTG TGGCCGGCGC CGCAATCGAT GCTGCAGTCC
CCCGACGTCA TCGTGGCGAT CGGCAACGGC TGGTGGACCG CGGGAACGTC GATCGTCGCC
ATCCAGCAGG CGAGCGCCGT CGCCTGGGCT AAACTCTTCA ACCGTCCACT GGTGACGGCC
TTCAACACTT GA
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| Protein sequence | MLIALSVASG WIGWSGNVLT IPVAMLFPAL WAHSTSRTTA ALVSAGYFLA ASRGLPLGVA
NFYAADMWPG LLLWLGASLS FILVHAVAWA KQPNLNRAEG QPGERRLARW VADIPLAEKG
LAMRYLVASL LMALPPFGIM GWAHPLTAAG VLFPGWGWWG LGATACLLVI MTGRRWQLAV
AVLGGLYVWS ATTWTPPKVP DRWTGVDLQH GENLGRDNSL DHHRDLIATV RAAAGPGTRF
VVLPESALGF WTPTVAQLWQ QGLRGSNLIV MAGAAVIDAG GYDNVIVAIS AGEAQILYRE
RMPVPVSMWQ PWRKWTAQGG GARAHFFANP VVDLAGTRIA PLICYEQFVL WPAPQSMLQS
PDVIVAIGNG WWTAGTSIVA IQQASAVAWA KLFNRPLVTA FNT
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