13 homologs were found in PanDaTox collection
for query gene Avi_0869 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011989  Avi_0869  Bacteriophage head-tail adaptor protein  100 
 
 
103 aa  209  1e-53  Agrobacterium vitis S4  Bacteria  normal  0.0406207  n/a   
 
 
-
 
NC_008254  Meso_1886  phage head-tail adaptor, putative  43.14 
 
 
105 aa  89  2e-17  Chelativorans sp. BNC1  Bacteria  normal  0.590361  n/a   
 
 
-
 
NC_007406  Nwi_1619  phage head-tail adaptor, putative  40.78 
 
 
109 aa  87.8  5e-17  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.171489  normal  0.258469 
 
 
-
 
NC_007406  Nwi_1475  phage head-tail adaptor, putative  40.78 
 
 
104 aa  84.3  5e-16  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.514151 
 
 
-
 
NC_009049  Rsph17029_0285  phage head-tail adaptor, putative  36.89 
 
 
107 aa  75.5  0.0000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1368  phage head-tail adaptor, putative  32.04 
 
 
107 aa  74.7  0.0000000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.504949 
 
 
-
 
NC_010721  Mpop_5449  hypothetical protein  35.79 
 
 
108 aa  62.8  0.000000001  Methylobacterium populi BJ001  Bacteria  n/a    n/a   
 
 
-
 
NC_007493  RSP_6046  hypothetical protein  33.01 
 
 
104 aa  58.2  0.00000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1716  phage head-tail adaptor, putative  29.81 
 
 
108 aa  50.1  0.00001  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3986  phage head-tail adaptor  27.18 
 
 
106 aa  47.8  0.00005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2482  hypothetical protein  25.51 
 
 
105 aa  46.6  0.0001  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_1291  phage head-tail adaptor  27.66 
 
 
105 aa  44.7  0.0005  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.184704  normal 
 
 
-
 
NC_011988  Avi_6189  Bacteriophage head-tail adaptor  32.11 
 
 
106 aa  43.9  0.0008  Agrobacterium vitis S4  Bacteria  normal  0.905636  n/a   
 
 
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