11 homologs were found in PanDaTox collection
for query gene RSP_6046 on replicon NC_007493
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007493  RSP_6046  hypothetical protein  100 
 
 
104 aa  202  9e-52  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1886  phage head-tail adaptor, putative  46.15 
 
 
105 aa  84.7  4e-16  Chelativorans sp. BNC1  Bacteria  normal  0.590361  n/a   
 
 
-
 
NC_007406  Nwi_1619  phage head-tail adaptor, putative  41.58 
 
 
109 aa  77.8  0.00000000000005  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.171489  normal  0.258469 
 
 
-
 
NC_007406  Nwi_1475  phage head-tail adaptor, putative  39.6 
 
 
104 aa  73.9  0.0000000000007  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.514151 
 
 
-
 
NC_009428  Rsph17025_1368  phage head-tail adaptor, putative  37.86 
 
 
107 aa  70.5  0.000000000008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.504949 
 
 
-
 
NC_009049  Rsph17029_0285  phage head-tail adaptor, putative  39.81 
 
 
107 aa  68.2  0.00000000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_010721  Mpop_5449  hypothetical protein  40 
 
 
108 aa  62  0.000000003  Methylobacterium populi BJ001  Bacteria  n/a    n/a   
 
 
-
 
NC_011989  Avi_0869  Bacteriophage head-tail adaptor protein  33.01 
 
 
103 aa  58.2  0.00000004  Agrobacterium vitis S4  Bacteria  normal  0.0406207  n/a   
 
 
-
 
NC_007964  Nham_2482  hypothetical protein  34.95 
 
 
105 aa  47  0.00008  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_3986  phage head-tail adaptor  36.54 
 
 
106 aa  46.6  0.0001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_6189  Bacteriophage head-tail adaptor  36.04 
 
 
106 aa  46.6  0.0001  Agrobacterium vitis S4  Bacteria  normal  0.905636  n/a   
 
 
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