Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_6189 |
Symbol | |
ID | 7381244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | + |
Start bp | 1194667 |
End bp | 1194987 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643649666 |
Product | Bacteriophage head-tail adaptor |
Protein accession | YP_002547890 |
Protein GI | 222107099 |
COG category | [R] General function prediction only |
COG ID | [COG5614] Bacteriophage head-tail adaptor |
TIGRFAM ID | [TIGR01563] phage head-tail adaptor, putative, SPP1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.905636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGCCG GGAAGCTTGA CCGGCGCATC ACGCTGCTGC GGGAAACCGA GACCGGGCGC GATGCCCTCA ACCAGCCGAT TTTGGAATGG GTTGGGATAA AGACGGTCTG GGCTGGTAAA ACAGTCAACA AGGGAACTGA GGTTGTGCAA GCGCAGCAGA TGAGCGGCAC ACGTCCACTA ACCTTTCGCA TTCGCCACCG TCCTGGTCTG AGCCTCAAGG ATCGGGTTCG GTATGATGGT GCGCTTTACG AGATTAAAGA CATTAGAGAG ATCGGGCGCC GGGTTGGCCT TGATCTCGAC TGCGTGGCGG TTGCGGAGTG A
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Protein sequence | MRAGKLDRRI TLLRETETGR DALNQPILEW VGIKTVWAGK TVNKGTEVVQ AQQMSGTRPL TFRIRHRPGL SLKDRVRYDG ALYEIKDIRE IGRRVGLDLD CVAVAE
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