Gene Avi_6189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_6189 
Symbol 
ID7381244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011988 
Strand
Start bp1194667 
End bp1194987 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content58% 
IMG OID643649666 
ProductBacteriophage head-tail adaptor 
Protein accessionYP_002547890 
Protein GI222107099 
COG category[R] General function prediction only 
COG ID[COG5614] Bacteriophage head-tail adaptor 
TIGRFAM ID[TIGR01563] phage head-tail adaptor, putative, SPP1 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.905636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGCCG GGAAGCTTGA CCGGCGCATC ACGCTGCTGC GGGAAACCGA GACCGGGCGC 
GATGCCCTCA ACCAGCCGAT TTTGGAATGG GTTGGGATAA AGACGGTCTG GGCTGGTAAA
ACAGTCAACA AGGGAACTGA GGTTGTGCAA GCGCAGCAGA TGAGCGGCAC ACGTCCACTA
ACCTTTCGCA TTCGCCACCG TCCTGGTCTG AGCCTCAAGG ATCGGGTTCG GTATGATGGT
GCGCTTTACG AGATTAAAGA CATTAGAGAG ATCGGGCGCC GGGTTGGCCT TGATCTCGAC
TGCGTGGCGG TTGCGGAGTG A
 
Protein sequence
MRAGKLDRRI TLLRETETGR DALNQPILEW VGIKTVWAGK TVNKGTEVVQ AQQMSGTRPL 
TFRIRHRPGL SLKDRVRYDG ALYEIKDIRE IGRRVGLDLD CVAVAE