12 homologs were found in PanDaTox collection
for query gene Amir_2308 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2308  zinc finger CDGSH-type domain protein  100 
 
 
55 aa  109  1.0000000000000001e-23  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000604897  n/a   
 
 
-
 
NC_013131  Caci_6636  zinc finger CDGSH-type domain protein  59.62 
 
 
59 aa  66.6  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.101492 
 
 
-
 
NC_009338  Mflv_1040  zinc finger CDGSH-type domain-containing protein  60.42 
 
 
81 aa  64.7  0.0000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_5790  zinc finger CDGSH-type domain-containing protein  58 
 
 
69 aa  63.5  0.0000000009  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2450  zinc finger CDGSH-type domain protein  65.91 
 
 
72 aa  63.2  0.000000001  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000296222  n/a   
 
 
-
 
NC_014210  Ndas_3468  Iron sulfur domain-containing, CDGSH-type  60 
 
 
71 aa  62  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_4940  zinc finger CDGSH-type domain-containing protein  57.14 
 
 
75 aa  59.3  0.00000002  Mycobacterium sp. KMS  Bacteria  normal  0.514942  normal 
 
 
-
 
NC_009077  Mjls_5219  zinc finger CDGSH-type domain-containing protein  57.14 
 
 
75 aa  59.3  0.00000002  Mycobacterium sp. JLS  Bacteria  normal  hitchhiker  0.00747207 
 
 
-
 
NC_013159  Svir_11410  iron-binding zinc finger protein, CDGSH type  59.57 
 
 
71 aa  59.3  0.00000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_4296  Iron sulphur domain-containing, CDGSH-type  58.7 
 
 
68 aa  58.9  0.00000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0157597  n/a   
 
 
-
 
NC_009664  Krad_3359  zinc finger CDGSH-type domain protein  60.98 
 
 
74 aa  53.1  0.000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.011447 
 
 
-
 
NC_014151  Cfla_0466  Iron sulfur domain-containing, CDGSH-type  44.19 
 
 
77 aa  41.2  0.004  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.336392  normal 
 
 
-
 
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