11 homologs were found in PanDaTox collection
for query gene Afer_0793 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_0793  major facilitator superfamily MFS_1  100 
 
 
397 aa  746    Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.351489  n/a   
 
 
-
 
NC_009954  Cmaq_0148  major facilitator transporter  28.27 
 
 
391 aa  141  1.9999999999999998e-32  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
NC_009440  Msed_0258  major facilitator transporter  30.24 
 
 
394 aa  116  5e-25  Metallosphaera sedula DSM 5348  Archaea  normal  0.987139  normal  0.546793 
 
 
-
 
NC_009954  Cmaq_0603  major facilitator transporter  29.91 
 
 
389 aa  115  1.0000000000000001e-24  Caldivirga maquilingensis IC-167  Archaea  normal  normal 
 
 
-
 
CP001800  Ssol_2686  major facilitator superfamily MFS_1  26.82 
 
 
386 aa  109  9.000000000000001e-23  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_009440  Msed_1252  major facilitator transporter  30.89 
 
 
379 aa  78.6  0.0000000000002  Metallosphaera sedula DSM 5348  Archaea  normal  normal 
 
 
-
 
NC_013521  Sked_02710  Major Facilitator Superfamily transporter  27.98 
 
 
428 aa  48.1  0.0003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.199882  normal 
 
 
-
 
NC_011004  Rpal_2086  major facilitator superfamily MFS_1  30.1 
 
 
547 aa  47.4  0.0004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.389714  n/a   
 
 
-
 
CP001800  Ssol_0869  major facilitator superfamily MFS_1  26.57 
 
 
487 aa  43.9  0.004  Sulfolobus solfataricus 98/2  Archaea  normal  0.0748352  n/a   
 
 
-
 
NC_007958  RPD_1958  major facilitator transporter  26.79 
 
 
530 aa  43.1  0.008  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.452075 
 
 
-
 
NC_007778  RPB_3496  MFS transporter  27.93 
 
 
531 aa  43.1  0.009  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.597192  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>