| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3496 |
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| Symbol | |
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| ID | 3911298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4000359 |
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| End bp | 4001954 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637885398 |
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| Product | MFS transporter |
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| Protein accession | YP_487102 |
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| Protein GI | 86750606 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.597192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGT CCGAACACCG ACGCCGTGAG CCGTCCGGCA GGCAATTGTT GTCCGACGAA
GCGGCGGCGG AACTGTCGCA CATTCCCACC GAAGTGATCG ATCTCGGCGA CGCGCCGCCG
CTGGCGCCGG CGAATACGCT GTCGCAGGGC GAAGTCCGCG CCATCCTGAT GAGTCTGCTG
CTGGCGATGT TCCTCGCCGC GCTCGACCAG ACCATCGTCG CCACCGCGCT GCCGACGATC
GGGCGGCAGT TCGGCGACGT CGAGAATCTG TCCTGGGTGA TCACCGCTTA TCTGTTGTCG
TCGACCGCGG TGGCGCCGGT GTTCGGCAGC CTCGCCGACA TTTACGGCCG CCGCGCCACC
ATCATCGCGT CGATCAGCCT GTTCATCGCC GGTTCAGTGA TGTGCGCGCT GGCGCCGAGC
CTGCTGGTGC TGATTCTCGG TCGCGCGCTG CAGGGGCTGG GCGGCGGCGG CATCATGCCG
ATCGTGCAGA CGGTGATCTC GGACGTGGTG ACGCCGCGCG AGCGCGGCAA GTATCAGGCC
TATTTCTCCG CCGTCTGGGT CTCGGCCGGG ATCGGCGGGC CGATCCTCGG CGGCGCCTTC
GCCGAGCATC TGCACTGGTC GATGATCTTC TGGATCAATC TGCCGCTGGC GATCGGCGCG
CTGGCGTTGC TGCTGCCGAA GATGGCCAAG ATTCCGACGT ATCACCGCCG CCGCAAGGTC
GACTGGCTGG GCGGCGTGCT GCTGATGGCC TCGGCGATGG CGGTGATGCT GGCGCTGACC
TGGGGCGGCA CGCGGTTCTC CTGGCTGTCG CCGACGATCC TGGCGCTGAG CGGCGGCGCA
GTGCTGCTCG CGGTGTGCTT CGTCTGGCAC GCGCTGCGGG CGCCCGAGCC GTTCCTGCCG
CTGCAATTGA TGGGCGGCAC GGTGGTGCCG TGGGCGATGG CGGCGGGCGG CTTCGCGATG
GGAGCGATGA TCGGCCTGAC GGTGCACATG CCGCTGTACT ACGAGGCGGT GTATCACCTG
ACCGCGAGCC AGTCCGGCCT GGCGCTGATC CCGATCGCCG CGGTGTCGGT GCTCGGCGCG
GCGTTCACCG GCCGCGCTAT GGTGAAGGTC GAGCGCTACA AGCGGATCGC GATCCTCGGC
ACCGGCTTCT CGGCGCTGAT GGCGGCGGCG ATCGCGGTGA CGACGCCGCT GCCGCTGTGG
CTGTTCCTGG CGCTGCTGTC GCTGTTCTCG ATCGGGCTCG GCACGGTGTT CCCGGTCACC
GTGGTGTCGA TCCAGAACGC GGTGGCGCGG CCGCAGATCG GCACCGCGAC CGGGGCGATG
AACTTCTTCC GCGCGCTGAT GGCGTCGTTC ACGGTGGCGG CGTTCACCGC GGTGCTGCTG
ATCGCGTTCG GCGGCGAGAT CCAGCTCGGC GGCGCCGAGC ATCGCCACGC CATCGGCACG
GTCGCTGCCG CCGACATGGT GGCGGCGTTC CGCTGGGTGT TCGCCGCGGC CGCCGCGATG
CTGGCCGCGT CGGCGATCTG CGTGGCGATC ATGGAAGAGC GCACGCTCGC CGGTCCGGAG
CAGACTTCGC CGCCGCCGCT GGAGATGGCC GAGTAG
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| Protein sequence | MSMSEHRRRE PSGRQLLSDE AAAELSHIPT EVIDLGDAPP LAPANTLSQG EVRAILMSLL
LAMFLAALDQ TIVATALPTI GRQFGDVENL SWVITAYLLS STAVAPVFGS LADIYGRRAT
IIASISLFIA GSVMCALAPS LLVLILGRAL QGLGGGGIMP IVQTVISDVV TPRERGKYQA
YFSAVWVSAG IGGPILGGAF AEHLHWSMIF WINLPLAIGA LALLLPKMAK IPTYHRRRKV
DWLGGVLLMA SAMAVMLALT WGGTRFSWLS PTILALSGGA VLLAVCFVWH ALRAPEPFLP
LQLMGGTVVP WAMAAGGFAM GAMIGLTVHM PLYYEAVYHL TASQSGLALI PIAAVSVLGA
AFTGRAMVKV ERYKRIAILG TGFSALMAAA IAVTTPLPLW LFLALLSLFS IGLGTVFPVT
VVSIQNAVAR PQIGTATGAM NFFRALMASF TVAAFTAVLL IAFGGEIQLG GAEHRHAIGT
VAAADMVAAF RWVFAAAAAM LAASAICVAI MEERTLAGPE QTSPPPLEMA E
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