8 homologs were found in PanDaTox collection
for query gene Afer_0071 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013124  Afer_0071  hypothetical protein  100 
 
 
1034 aa  1941    Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2290  YD repeat protein  32.15 
 
 
6272 aa  54.7  0.000009  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1387  integrin-like protein  29.14 
 
 
1490 aa  52.8  0.00004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.051369 
 
 
-
 
NC_009380  Strop_2349  cell wall anchor domain-containing protein  44.58 
 
 
551 aa  51.6  0.00007  Salinispora tropica CNB-440  Bacteria  normal  0.846562  normal  0.0247307 
 
 
-
 
NC_008009  Acid345_0450  protease  28.83 
 
 
1207 aa  47.8  0.001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.470359 
 
 
-
 
NC_008009  Acid345_0460  integrin-like protein  39.56 
 
 
1124 aa  47.4  0.001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.849275 
 
 
-
 
NC_009953  Sare_1086  cell wall anchor domain-containing protein  39.45 
 
 
566 aa  47.4  0.002  Salinispora arenicola CNS-205  Bacteria  normal  0.628609  normal  0.014892 
 
 
-
 
NC_009953  Sare_1715  regulator of chromosome condensation, RCC1  40 
 
 
563 aa  45.4  0.005  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000999119 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>