Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_1387 |
Symbol | |
ID | 4068922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | - |
Start bp | 1678692 |
End bp | 1683164 |
Gene Length | 4473 bp |
Protein Length | 1490 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637983396 |
Product | integrin-like protein |
Protein accession | YP_590463 |
Protein GI | 94968415 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.051369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGAACT CTCGCATTCG TTTGCTTGCC GTTCCTCTCC TGCTTGCCAG CGTTCTTCTT TTCGTTCCGC CAATCGCGAT AGCCGGCACC TCGACCACCA CGACGCTGAC GATCACCAGT GGTGGCTCTT CTGTATCGAG TGTTACGCCG GGCACTGTTG TCGCACTCAA TGCGCTGGTC AAAGCGGGTT CTACCGCGGT GCTCCCGGGC ACCGTGCGGT TCTGTGATAC CTCGGTGAAT TCTCATTGTC TGGACGGTGC TTTGCTCGGC ACGGCACAAT TACTCTCCGA CGGTTCTGCG AGCATCAAGC TACGCCTCGG TGTAGCGACA CACTCCATTC AGGCGAAGTT TGACGGGACC CTTACCTACT CCGCCTCCGC CTCGAGTACT TCCTCCCTCA CCGTCTCGGG TGGAAAATCT CCAACCCTCA CCACGTTATC CTGGGTTAGT GGCTCAACGT CGGTATCCGC GACGGTCGCA GGTTTTCCGC CATCCACTGT TACCACCTCT CCCAGCGGAA CCGTCACGCT CCTCGACACG AGCCATGGCA ATGCGGTTGT CGGAACAGGA TCTCTCACTG CCGGCAGCCT CGGAGATGGG ACTGTCAGTT TCTTTCCATC GCAAACTCTA TTCGATGATC ACGACGGCAA TAATCCGCGA GAGACGCTGT TCACCGATCT CAACGGCGAC GGGATACCCG ATCTGATCTT GGTGAATTCT GCGTATAACG TCACAGGCCA TCTCTCGATC TGGCTCGGAA ATGGAGATGG AACCTTTCAA CCTCCGCTGG CTTCCTATGC TATTGACAAG GATGCCCAGG GACTTCTGGT AGCGGATTTC AATAACGATG GCATCCCCGA TGTCGCCGTT GGCTCTGACG GTGGGACTCT TATCTGGATA TTCCCTGGAA ATGGCGACGG CACGCTGAAC GCGCCAGTCT ACGTGGAAGT GGAACACCAT GGAGACGACG GCGACCCCCA TCCACTTCGG CTCGTGGCCG GCGACTTCAA TCATGATGGC AACCTTGATA TCGCCGCCGC CACCTCAGGC AATCTCGCGA ACTCCATCAT GGTCGTCCTC ATTGGCAATG GCGACGGCAC CTTCCATACC CCGGTCCGTT ACAACTTCAC CGGTTCCTGC AGCGGCGTCA GCGAACACTA CCTGGTTGGC GGCGATCTCA ACGGCGATGG CAACGTCGAT TTGGTGATGA ACGATGACGA GTGCTCAAAC CTGATCTGGG TGTTCATCGG CAATGGCGAC GGTACCTTCC AAACGCCCTA CAGCGTAACC GTTACCACAG CCTCCGAAGT GGAATCACCA ATCGTCGCCG GAGATTTCGA CGGGGACGGT GTCCCGGATA TTGCGGTTAT CGGAGCCGAC GAACAGGTTG TGCACGTACT GCTCAGCAAG GGAGATGGTA CGTTCAAAAC GCCGGCGAGC TACGGCATAG GTCAGGTAGG ACTTAAGATT GCCACCACCG ACTTCAATGG AGATCACATA CCTGACCTGG TAATTCTAAA TTCCTACGAC TCCACCCTCT CGGTCCTGCT CGGGAAAGGC GACGGTACAT TCCTTCCGCA AATCACGCTT CCTTCTTTGA ACTATGGCCT CAATGTGGCA GACCTGAATG GCGACGGCAA GCCCGACATC GCCAGCACCT CTAACCCCGC GTCGAACACC CTGAAACCAC TACCCCCGCA AGCAAGTATC ATGCTGAATG CCTCGGACGC CGCCTCCGCG ACCGTGAGCT TCGATGTCAC CAGCCTCTTG GCATCCGGAG TCCACGTACT GCAGGCCTCG TACCCGGGAG ATGCCAACTA CTCCGCGGGT GTTTCTCGTC TGTTGCCTCT CGTGGGTATT GGCGCAACAA CCTTAAACAT GAGTCTTTAT CCCGAACCCG TGCCTTACGG TGGCACAGTC ACCCTCACAG CAACCCTAAC GCCGAATTCC GGTACAGACG GCGAGATCAT CTCATTCTTC ACGAACGGAA GTCACTTGGG CACGGCAACG CTGAGCTCTG GCGTCGCCAC CCTTTCCACC TCCACACTCG CGGCCGGTCT TAATTTGCTC ACTGCCTCTT ACGCGGGCAA CGTGAACTAC TCCAGTTCCG TCTCCGATCC CGTCGACGAG ACGGTGCGCG GAATCGAGAC GACACTGAGC TTAGGCGCCA GGCCCAACCC TGCGTCCTAC GGGAGCCCTG TCTCCCTCAA GGCAACCCTC ACCCCAAGCG CTGGCACGGA TGGCGAACAG ATCTCCTTCT ACGAACAGGT TTCCCCCTCT TTCTCCGCGA GAATTTTCAT TGGAACCGCC ACGCTGGCTT CTGGTGTCGC CACCCTATCT ACCTCCGCCC TCGGGGTCGG CGACCACTCG CTGTGGGCTG CTTACCCCGG CGATACCACC CACGACATCG AAAGCTCCAG TACTGTTTCG GAAACCGTGT TAGGGACTGC ACCCGCCCTT ACCCTCGGTG CTAATCCAAA ACCGGTGGAT CACGGTCATC TCGTGACCCT TACCGCAACC ATCTCTCCAA GCTCCGGCAC AGACGGAGAG AGAATTACAT TTTTTAGCAA CGGAAATATC CTCGGCAGCT CCGCGCTGAG TTCAGGAGTG GCGACCCTAT CAACCGCTGC GCTCGTAGCC GGCACCGATT CGCTTACCGC TTCTTACCCC GGCGATGCTA ATTACGGTAA TCGAACCTCT AATACCGTTT CGGTCACCGT AAACCCGCCA GCCTCCACGA CTACCGTGCT GCATGTTTCG CCGCCTCGGT TGAGCACGCC TGCAACCGTG GTTCTGAGTG CAACCGTCAC GGCATCGAGT GCCCCGCTCT CTCCCGGACA AGTTAAGTTC TGCGACGCGT CGATCAATGC ATCCTGTAGT GGGAACGCGT TTCTCGGGAT CGCCCAGCTT CTGTCGAACG GCACGGCGCA ATTGACCACG CGTCTCGGCT TTGGCGTTCA CAACCTTCAA GCCGCTTTTG TTGGCCAGCG CAATTACGCC TCGTCTTCTT CGTCGGTGGT CGTGTTCCAC CAAAGCTGGA AGACCGGGGC CGCTATGTTA TGGATCACGG CCTCCACAGG TACACTTTCC GGAAGCTACG ATCTTTCGGT GACGCTGGAC GGCCTCATGA ACTCGAGCAC ACCCGCGGCG CCCGCTGGCT CCGTCTCTTT CCTTGACGCA AGCAATAGCA ACGCGGTGGT CGCGACCGGC TCTCTCGTCG CCGCTTCGGC GCCTGCACTC ACCCTGAAGA ATGTTTTCCA GCCCACCATC GGGACTAACC CCGACACCAT GGCGTTTGGC GACTTCAACC ACGACGGCAT TCCTGATATG GCCATCAGTG GGTGGGACAA CAACCTCTGG GTCCTCCTCG GCAATGGCGA TGGAACCTTC ACCGTGAAAC CGAGCTTGCC ACTCGTAACT CTTTCTGGCC CCGATTTCCG TAATCATCCA CTCGTTGTTG CTGACTTGAA CGGCGACGGA AACATCGATG TTGCTGTAAC CAATCGCTAC GGCAAACTTG CAGTCTTCCT CGGGAACGGT GATGGAACCT TTCAATCGCC ACTGACCACC AATCTGCCTG GCGGGACGTC GCAGATGATT TCGGCCGATG TAAACGGCGA TGGCAAACCC GATCTGGTGC TCATCGGCGG CGCTACGTCG CCGATCCTAA TTCTATTGGG CAATGGCGAT GGTACGTTCA TCACCGGCAG TGCCCCAGTG GATGCAGGTC TCTGCGGGAC GCCTTACCAG AATTCGATCG CCAGCAACGA CTTCAATGAA GACGGTGTGC CTGATCTCGT CCTTGTTCCT GTAGCCAACC CATCTTCTCC GCAACCCGGC TGCGTCCTAT TCGGAAATGG GGACGGCACT TACTCGCGGC CGCAGAGTCT CGCGGTGGGC AACGGTGCCG GATGGGTCGC CACCGCCGAT CTCAATGGCG ATGGCCATGC CGACCTCGTC GTCACGGATT CCATTGCGAA CACCGTTTCC GTCTCCCTCG GAAATGGCGA CGGTACCTTC CAGACGGCGG TGCCCTACGC CGTCGGCTTG AATCCTGAGC ACGTCACGAT CGCGGACTTG AACCAGGATG GGAAGCCCGA CCTGATCGTG ACCAATGACA ACTACCACGG CACCGTTTCC ATCCTTTTGG GAAATGGCAA CGGCACGTTC CAGCCTCAAC AAACCATTAA TGCGGGGGGC AATTCCATCT TCACTGCGCT CACCGACATG AATGGTGACG GCAAGCCTGA TATCGCAGTG GTGAATTACC AGGGCGCCGG GACAGGCCCT GAACGGCTCT CCGTCTTCTT GAACTATTGG GGGCGCAACG CCACTGCCAC CGCAAACAAC GTAATCGTCA CGGGTACCGG AACACATCAG ATCAAGGGGT ATTTCCCGGG CGATACGAAT TATCGGCAAG GAACGTCCGC TGGGGTCGGA CTAACGGCGG TACCAGCGGC GCCTCAAAAA TAA
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Protein sequence | MKNSRIRLLA VPLLLASVLL FVPPIAIAGT STTTTLTITS GGSSVSSVTP GTVVALNALV KAGSTAVLPG TVRFCDTSVN SHCLDGALLG TAQLLSDGSA SIKLRLGVAT HSIQAKFDGT LTYSASASST SSLTVSGGKS PTLTTLSWVS GSTSVSATVA GFPPSTVTTS PSGTVTLLDT SHGNAVVGTG SLTAGSLGDG TVSFFPSQTL FDDHDGNNPR ETLFTDLNGD GIPDLILVNS AYNVTGHLSI WLGNGDGTFQ PPLASYAIDK DAQGLLVADF NNDGIPDVAV GSDGGTLIWI FPGNGDGTLN APVYVEVEHH GDDGDPHPLR LVAGDFNHDG NLDIAAATSG NLANSIMVVL IGNGDGTFHT PVRYNFTGSC SGVSEHYLVG GDLNGDGNVD LVMNDDECSN LIWVFIGNGD GTFQTPYSVT VTTASEVESP IVAGDFDGDG VPDIAVIGAD EQVVHVLLSK GDGTFKTPAS YGIGQVGLKI ATTDFNGDHI PDLVILNSYD STLSVLLGKG DGTFLPQITL PSLNYGLNVA DLNGDGKPDI ASTSNPASNT LKPLPPQASI MLNASDAASA TVSFDVTSLL ASGVHVLQAS YPGDANYSAG VSRLLPLVGI GATTLNMSLY PEPVPYGGTV TLTATLTPNS GTDGEIISFF TNGSHLGTAT LSSGVATLST STLAAGLNLL TASYAGNVNY SSSVSDPVDE TVRGIETTLS LGARPNPASY GSPVSLKATL TPSAGTDGEQ ISFYEQVSPS FSARIFIGTA TLASGVATLS TSALGVGDHS LWAAYPGDTT HDIESSSTVS ETVLGTAPAL TLGANPKPVD HGHLVTLTAT ISPSSGTDGE RITFFSNGNI LGSSALSSGV ATLSTAALVA GTDSLTASYP GDANYGNRTS NTVSVTVNPP ASTTTVLHVS PPRLSTPATV VLSATVTASS APLSPGQVKF CDASINASCS GNAFLGIAQL LSNGTAQLTT RLGFGVHNLQ AAFVGQRNYA SSSSSVVVFH QSWKTGAAML WITASTGTLS GSYDLSVTLD GLMNSSTPAA PAGSVSFLDA SNSNAVVATG SLVAASAPAL TLKNVFQPTI GTNPDTMAFG DFNHDGIPDM AISGWDNNLW VLLGNGDGTF TVKPSLPLVT LSGPDFRNHP LVVADLNGDG NIDVAVTNRY GKLAVFLGNG DGTFQSPLTT NLPGGTSQMI SADVNGDGKP DLVLIGGATS PILILLGNGD GTFITGSAPV DAGLCGTPYQ NSIASNDFNE DGVPDLVLVP VANPSSPQPG CVLFGNGDGT YSRPQSLAVG NGAGWVATAD LNGDGHADLV VTDSIANTVS VSLGNGDGTF QTAVPYAVGL NPEHVTIADL NQDGKPDLIV TNDNYHGTVS ILLGNGNGTF QPQQTINAGG NSIFTALTDM NGDGKPDIAV VNYQGAGTGP ERLSVFLNYW GRNATATANN VIVTGTGTHQ IKGYFPGDTN YRQGTSAGVG LTAVPAAPQK
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