Gene Acid345_0460 details

Gene Information

• Locus tag: Acid345_0460
• ID: 4069455
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Koribacter versatilis Ellin345
• Kingdom: Bacteria
• Replicon accession: NC_008009
• Strand: +
• Start bp: 554601
• End bp: 557975
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637982464
• Product: integrin-like protein
• Protein accession: YP_589539
• Protein GI: 94967491

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.849275
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCAATG GCGTGCGTAC TCATTTGCCC GCGCAACCGA GCTTCAAGGG AAAGATATTT 
CCCTTCAATC GCCCACCCTC GTCAGATTCA TCGGAGAGAA TTCGTAACTC CGCATTGGCC 
CGAGCGAGTA GTTCAACCGC GTCCATGCCA GGACTACTTG GCGCACCTTA TGTCCCCGCA 
ACGATCGACA GCGACACTTC TGGCGTGTAC TCATCGGCGT CCACTGATGT CGATGGCAAG 
AGTGGAATCG ATCTGGTGAC CGTGGACTAT GACGGAACCT TGAACGTGCT TCTGAATGAC 
GGTCATGGGA AGCTGGCTCT GTCCTCCAGC AACACCTCCG CCGTGGCGCT CAATCCAGGC 
ATCGTTTACA TCGAAGTCGC TGACCTCAAC CACGACGGAC ATCCCGACGT GGTTGCGATG 
GATGCCTCAA ACAGCGCCTT CCTCGTGTTT CTGAACAATG GCGACGGAAC GTTTGGCGAT 
GCGTCGAGCG TGTCGGTGGC TCCTGCAAGT GGCGCCAACT ATTTGAACGG GGGCTCCTTC 
GCGGTTGGCG ATGTCAATGG TGACGGCATC CCAGACGTCG TGGCCATCTC GAACCTTCAA 
AACGGAAGCT ATCCCACCTA CACCACGGTT TTCTCGCAGC AGACTTTCCT TGGAAATGGC 
GACGGGACTT TCGCTGTTCC TGGGAGCAGT ACGGACGTGA CCTTGCCGGG TTTCCAGTTC 
GTGCAATACG GGCAGGGAGT CGTCATCGCT GATCTGAACG GCGATAAGAA GGCCGATATT 
GTGACCGAGT ATTACGACGC GATCAATTAC TGGGTGACCG TGGCGGGTAG CCTAGGTAAC 
GGGGACGGCT CATTCGCCGC GATCGGATCC GGTTCGGCAG TGCGCGCTGT TCTCGGCATT 
CATTCGGCTT TGCGCGTTCT TGATCTCAAT GGCGACAAGA ATCCAGACGC GGTCTTCATG 
GTTGGTGATG GGAACGCGTA TGTTGCCCTC GGAAACGGCG ACGGTACCTT CCGCTCCTCA 
AACACCGTAC TGCATGGTCT TCCGGCGGCC CAGGCATTTC AACTGGGCGA CTTCAACGCC 
GACGGTTATC TCGATTTACT TGTCTTCAAC ATCGGCAGCC AAGCCGTCTA TGCGGGGCGC 
GGCGATGGGA CGTTTAATCC AGAGCCAAAA GCTCAGTACG GTGGAAACCA GGCTGGCACT 
CAGGAGCCCT CACCCGCGGA CTTTGACGGC GATGGCTTCG TCGACTTCGT GATTGTGGAC 
CCCGCGTATG GAACCGCGTC GCTCTACTAC GGAAATGGCG ACGGAACGTT TGTCGCCCAG 
CGTGCGATTG CTCCGTCGAA CTCATCTTCG ACGATCCCAA ACGCGCAGGA GGCTCCGAGC 
AACTTTGTCG CAGTGGCGAC CGGCGACGTC AACAACGATG GCCTGGCCGA TGTGCTCGCT 
TACGACTACA CGAGTCCGTT TTACACCGAC TTTCGCATGT ACCCGGATGT GGTGCTTGGC 
ATCGGCGATG GCAAAGGTGG GTTCAGCTTC ACAAAGCTGG TGTCGGGTTA CCAGTTGTGG 
ATTGCAAAGG GGTTCGCGGT GGCCCCCATT GTTTCCGACT TCGACCACGA CGGAAAGTTC 
GATTTGGTGC TTGAGACTGA CACTGGCCTG TCGATTGCAC TGGGGAACGC GGATGGCACG 
ATGGGAGCGT TCAAGGCGAT CTCGCTGCCC GTCGCGAGTT CCGGCTGTTC TTTCGGAAAC 
TTCGACGTCG GCAATATCGA TAACGACTCG AACGGAAACC TCGACATGTT GATCGCATAC 
AACGGTGAAG GTCCGAATTG TATCGGCAAC GACACCCCCT CCGGCTACTT CGTCCTGCTT 
GGCGATGGCA AAGGCGGTTT CGATGCCGCG TTTACCCCAT ATGGCGGATA CGTGTCTGAG 
ACCAAATTGA TCGACTTCGA CGGAGATGGC ATTCTCGATA TGGCGGTCGA CGACGGTTAC 
CAGACCGGCA TCCTCATCTG CAATAGTTGC CCCACGCCCA TCACGGTTCT GAAAGGACAC 
GGCGACGGCA CCTTTGATAC CGACGGCGCG CACCTGGTGC TGGATGGTTG GCGCATTTCA 
TGGCTAGTTG TGGGTGACTA CGATCACGAT GGCAAGCAGG ACCTGACGCT CTTGTCGCGA 
GGCCAGCGCG ATGATGCGTC GGGTGGCCTC GTGGACGATA CCGAAGGCAT ACTCCTGCTA 
AAAGGCAACG GCGATTTTAC GTTTAAAGAT CCGGTGCTAA TTGCGAAAGA TACTTTTGCG 
ACCCAGGCGC GATACGTCGA TTTAAATGGC GATGGGTTTC CTGACCTCAT CTTTGCACTC 
GACATGTCAT TCGAAGCGGT GCCAACTTAC AGCGGCTTGG TATTGATGCA GAATCTTGGC 
GACGGCTCTT TCTCCGAGCC GATGAACTAC CTTGAACCAT TCGGTACCGA GCAAATCTCC 
ATCGCTGACT TTAACGGCGA TGGCGCGCCC GATGTGTTGG TAGCGCCCTA TTTCTACGAC 
GGATTCACTC CCTCTGTGCT GTTCTTGAAC CAGGGTGGAG ACTCCCTGAG CTTGACAGCA 
ACACCGAACT CCGTGACGCA GGGCGAAGAC GTGGTGCTGC GCGCTACGTT GAACGCCGTT 
TTAAGTGGAG CCTCTGGCTC TGTAACGTTC ACGTCGAACG GCGCGGTGAT CGGAACCGCT 
GAGTTGAGCA CAGGTTCGGT CGCCGAACTT ACTACATCGG AGTTACCCGC AGGAACCGAC 
ACCGTGACGG CCACCTACGC CGGAGATGCG AACCATAACG CAGCGACCTC GGCGGTCGCG 
AGTGTCTCGG TGCAAAGCTT GGCGCCTTCG TTCAGCATCA ACGCCACTCC ACCCTCACTG 
AATTTGAAGG CTGGGCAATC TGGATCGGTG ACGTTGAACC TTGCGGCGAA CGCCATGTTC 
AGTGGATCAG TCAGCTTTAC CTGTTCCGGG CTGCCTGCCA GTGCGAGCTG CTCATTCTCG 
CCGGCTTCGG TGGCACTCGA TAGCGGAAAA ACTGGCACCG TTACTCTACA AATAAAGACA 
GCTGGCACCA GTCAGGCGCG CGCAATTACC AACCGCTCGC TGTGGACTTC TGCTGCGGGA 
CTCGCGCTGA TGCAGTGCCT GTTGCTGGTG CTGCCGATCC GGCGTCGCAA GCTCGCACGA 
TTGTTCGCGA GATACTCCGC GGGCCTGCTC TGCCTTCTGA TGTTGGTTGG CATTTCTGCG 
TGCGGCGGGA GCAGCCATGA CAGTTCAGGT GGAACACCAA CCGGCAATTC GACAATCACT 
GTTACAGGGA GCGCCAGTTC TGGCTCCACG ACAGTGACGC AGACTGCCTT GATTTCTGTC 
TCAGTAACCA ACTAG 

 

Protein sequence

MRNGVRTHLP AQPSFKGKIF PFNRPPSSDS SERIRNSALA RASSSTASMP GLLGAPYVPA 
TIDSDTSGVY SSASTDVDGK SGIDLVTVDY DGTLNVLLND GHGKLALSSS NTSAVALNPG 
IVYIEVADLN HDGHPDVVAM DASNSAFLVF LNNGDGTFGD ASSVSVAPAS GANYLNGGSF 
AVGDVNGDGI PDVVAISNLQ NGSYPTYTTV FSQQTFLGNG DGTFAVPGSS TDVTLPGFQF 
VQYGQGVVIA DLNGDKKADI VTEYYDAINY WVTVAGSLGN GDGSFAAIGS GSAVRAVLGI 
HSALRVLDLN GDKNPDAVFM VGDGNAYVAL GNGDGTFRSS NTVLHGLPAA QAFQLGDFNA 
DGYLDLLVFN IGSQAVYAGR GDGTFNPEPK AQYGGNQAGT QEPSPADFDG DGFVDFVIVD 
PAYGTASLYY GNGDGTFVAQ RAIAPSNSSS TIPNAQEAPS NFVAVATGDV NNDGLADVLA 
YDYTSPFYTD FRMYPDVVLG IGDGKGGFSF TKLVSGYQLW IAKGFAVAPI VSDFDHDGKF 
DLVLETDTGL SIALGNADGT MGAFKAISLP VASSGCSFGN FDVGNIDNDS NGNLDMLIAY 
NGEGPNCIGN DTPSGYFVLL GDGKGGFDAA FTPYGGYVSE TKLIDFDGDG ILDMAVDDGY 
QTGILICNSC PTPITVLKGH GDGTFDTDGA HLVLDGWRIS WLVVGDYDHD GKQDLTLLSR 
GQRDDASGGL VDDTEGILLL KGNGDFTFKD PVLIAKDTFA TQARYVDLNG DGFPDLIFAL 
DMSFEAVPTY SGLVLMQNLG DGSFSEPMNY LEPFGTEQIS IADFNGDGAP DVLVAPYFYD 
GFTPSVLFLN QGGDSLSLTA TPNSVTQGED VVLRATLNAV LSGASGSVTF TSNGAVIGTA 
ELSTGSVAEL TTSELPAGTD TVTATYAGDA NHNAATSAVA SVSVQSLAPS FSINATPPSL 
NLKAGQSGSV TLNLAANAMF SGSVSFTCSG LPASASCSFS PASVALDSGK TGTVTLQIKT 
AGTSQARAIT NRSLWTSAAG LALMQCLLLV LPIRRRKLAR LFARYSAGLL CLLMLVGISA 
CGGSSHDSSG GTPTGNSTIT VTGSASSGST TVTQTALISV SVTN