Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acid345_0460 |
Symbol | |
ID | 4069455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Koribacter versatilis Ellin345 |
Kingdom | Bacteria |
Replicon accession | NC_008009 |
Strand | + |
Start bp | 554601 |
End bp | 557975 |
Gene Length | 3375 bp |
Protein Length | 1124 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637982464 |
Product | integrin-like protein |
Protein accession | YP_589539 |
Protein GI | 94967491 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.849275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAATG GCGTGCGTAC TCATTTGCCC GCGCAACCGA GCTTCAAGGG AAAGATATTT CCCTTCAATC GCCCACCCTC GTCAGATTCA TCGGAGAGAA TTCGTAACTC CGCATTGGCC CGAGCGAGTA GTTCAACCGC GTCCATGCCA GGACTACTTG GCGCACCTTA TGTCCCCGCA ACGATCGACA GCGACACTTC TGGCGTGTAC TCATCGGCGT CCACTGATGT CGATGGCAAG AGTGGAATCG ATCTGGTGAC CGTGGACTAT GACGGAACCT TGAACGTGCT TCTGAATGAC GGTCATGGGA AGCTGGCTCT GTCCTCCAGC AACACCTCCG CCGTGGCGCT CAATCCAGGC ATCGTTTACA TCGAAGTCGC TGACCTCAAC CACGACGGAC ATCCCGACGT GGTTGCGATG GATGCCTCAA ACAGCGCCTT CCTCGTGTTT CTGAACAATG GCGACGGAAC GTTTGGCGAT GCGTCGAGCG TGTCGGTGGC TCCTGCAAGT GGCGCCAACT ATTTGAACGG GGGCTCCTTC GCGGTTGGCG ATGTCAATGG TGACGGCATC CCAGACGTCG TGGCCATCTC GAACCTTCAA AACGGAAGCT ATCCCACCTA CACCACGGTT TTCTCGCAGC AGACTTTCCT TGGAAATGGC GACGGGACTT TCGCTGTTCC TGGGAGCAGT ACGGACGTGA CCTTGCCGGG TTTCCAGTTC GTGCAATACG GGCAGGGAGT CGTCATCGCT GATCTGAACG GCGATAAGAA GGCCGATATT GTGACCGAGT ATTACGACGC GATCAATTAC TGGGTGACCG TGGCGGGTAG CCTAGGTAAC GGGGACGGCT CATTCGCCGC GATCGGATCC GGTTCGGCAG TGCGCGCTGT TCTCGGCATT CATTCGGCTT TGCGCGTTCT TGATCTCAAT GGCGACAAGA ATCCAGACGC GGTCTTCATG GTTGGTGATG GGAACGCGTA TGTTGCCCTC GGAAACGGCG ACGGTACCTT CCGCTCCTCA AACACCGTAC TGCATGGTCT TCCGGCGGCC CAGGCATTTC AACTGGGCGA CTTCAACGCC GACGGTTATC TCGATTTACT TGTCTTCAAC ATCGGCAGCC AAGCCGTCTA TGCGGGGCGC GGCGATGGGA CGTTTAATCC AGAGCCAAAA GCTCAGTACG GTGGAAACCA GGCTGGCACT CAGGAGCCCT CACCCGCGGA CTTTGACGGC GATGGCTTCG TCGACTTCGT GATTGTGGAC CCCGCGTATG GAACCGCGTC GCTCTACTAC GGAAATGGCG ACGGAACGTT TGTCGCCCAG CGTGCGATTG CTCCGTCGAA CTCATCTTCG ACGATCCCAA ACGCGCAGGA GGCTCCGAGC AACTTTGTCG CAGTGGCGAC CGGCGACGTC AACAACGATG GCCTGGCCGA TGTGCTCGCT TACGACTACA CGAGTCCGTT TTACACCGAC TTTCGCATGT ACCCGGATGT GGTGCTTGGC ATCGGCGATG GCAAAGGTGG GTTCAGCTTC ACAAAGCTGG TGTCGGGTTA CCAGTTGTGG ATTGCAAAGG GGTTCGCGGT GGCCCCCATT GTTTCCGACT TCGACCACGA CGGAAAGTTC GATTTGGTGC TTGAGACTGA CACTGGCCTG TCGATTGCAC TGGGGAACGC GGATGGCACG ATGGGAGCGT TCAAGGCGAT CTCGCTGCCC GTCGCGAGTT CCGGCTGTTC TTTCGGAAAC TTCGACGTCG GCAATATCGA TAACGACTCG AACGGAAACC TCGACATGTT GATCGCATAC AACGGTGAAG GTCCGAATTG TATCGGCAAC GACACCCCCT CCGGCTACTT CGTCCTGCTT GGCGATGGCA AAGGCGGTTT CGATGCCGCG TTTACCCCAT ATGGCGGATA CGTGTCTGAG ACCAAATTGA TCGACTTCGA CGGAGATGGC ATTCTCGATA TGGCGGTCGA CGACGGTTAC CAGACCGGCA TCCTCATCTG CAATAGTTGC CCCACGCCCA TCACGGTTCT GAAAGGACAC GGCGACGGCA CCTTTGATAC CGACGGCGCG CACCTGGTGC TGGATGGTTG GCGCATTTCA TGGCTAGTTG TGGGTGACTA CGATCACGAT GGCAAGCAGG ACCTGACGCT CTTGTCGCGA GGCCAGCGCG ATGATGCGTC GGGTGGCCTC GTGGACGATA CCGAAGGCAT ACTCCTGCTA AAAGGCAACG GCGATTTTAC GTTTAAAGAT CCGGTGCTAA TTGCGAAAGA TACTTTTGCG ACCCAGGCGC GATACGTCGA TTTAAATGGC GATGGGTTTC CTGACCTCAT CTTTGCACTC GACATGTCAT TCGAAGCGGT GCCAACTTAC AGCGGCTTGG TATTGATGCA GAATCTTGGC GACGGCTCTT TCTCCGAGCC GATGAACTAC CTTGAACCAT TCGGTACCGA GCAAATCTCC ATCGCTGACT TTAACGGCGA TGGCGCGCCC GATGTGTTGG TAGCGCCCTA TTTCTACGAC GGATTCACTC CCTCTGTGCT GTTCTTGAAC CAGGGTGGAG ACTCCCTGAG CTTGACAGCA ACACCGAACT CCGTGACGCA GGGCGAAGAC GTGGTGCTGC GCGCTACGTT GAACGCCGTT TTAAGTGGAG CCTCTGGCTC TGTAACGTTC ACGTCGAACG GCGCGGTGAT CGGAACCGCT GAGTTGAGCA CAGGTTCGGT CGCCGAACTT ACTACATCGG AGTTACCCGC AGGAACCGAC ACCGTGACGG CCACCTACGC CGGAGATGCG AACCATAACG CAGCGACCTC GGCGGTCGCG AGTGTCTCGG TGCAAAGCTT GGCGCCTTCG TTCAGCATCA ACGCCACTCC ACCCTCACTG AATTTGAAGG CTGGGCAATC TGGATCGGTG ACGTTGAACC TTGCGGCGAA CGCCATGTTC AGTGGATCAG TCAGCTTTAC CTGTTCCGGG CTGCCTGCCA GTGCGAGCTG CTCATTCTCG CCGGCTTCGG TGGCACTCGA TAGCGGAAAA ACTGGCACCG TTACTCTACA AATAAAGACA GCTGGCACCA GTCAGGCGCG CGCAATTACC AACCGCTCGC TGTGGACTTC TGCTGCGGGA CTCGCGCTGA TGCAGTGCCT GTTGCTGGTG CTGCCGATCC GGCGTCGCAA GCTCGCACGA TTGTTCGCGA GATACTCCGC GGGCCTGCTC TGCCTTCTGA TGTTGGTTGG CATTTCTGCG TGCGGCGGGA GCAGCCATGA CAGTTCAGGT GGAACACCAA CCGGCAATTC GACAATCACT GTTACAGGGA GCGCCAGTTC TGGCTCCACG ACAGTGACGC AGACTGCCTT GATTTCTGTC TCAGTAACCA ACTAG
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Protein sequence | MRNGVRTHLP AQPSFKGKIF PFNRPPSSDS SERIRNSALA RASSSTASMP GLLGAPYVPA TIDSDTSGVY SSASTDVDGK SGIDLVTVDY DGTLNVLLND GHGKLALSSS NTSAVALNPG IVYIEVADLN HDGHPDVVAM DASNSAFLVF LNNGDGTFGD ASSVSVAPAS GANYLNGGSF AVGDVNGDGI PDVVAISNLQ NGSYPTYTTV FSQQTFLGNG DGTFAVPGSS TDVTLPGFQF VQYGQGVVIA DLNGDKKADI VTEYYDAINY WVTVAGSLGN GDGSFAAIGS GSAVRAVLGI HSALRVLDLN GDKNPDAVFM VGDGNAYVAL GNGDGTFRSS NTVLHGLPAA QAFQLGDFNA DGYLDLLVFN IGSQAVYAGR GDGTFNPEPK AQYGGNQAGT QEPSPADFDG DGFVDFVIVD PAYGTASLYY GNGDGTFVAQ RAIAPSNSSS TIPNAQEAPS NFVAVATGDV NNDGLADVLA YDYTSPFYTD FRMYPDVVLG IGDGKGGFSF TKLVSGYQLW IAKGFAVAPI VSDFDHDGKF DLVLETDTGL SIALGNADGT MGAFKAISLP VASSGCSFGN FDVGNIDNDS NGNLDMLIAY NGEGPNCIGN DTPSGYFVLL GDGKGGFDAA FTPYGGYVSE TKLIDFDGDG ILDMAVDDGY QTGILICNSC PTPITVLKGH GDGTFDTDGA HLVLDGWRIS WLVVGDYDHD GKQDLTLLSR GQRDDASGGL VDDTEGILLL KGNGDFTFKD PVLIAKDTFA TQARYVDLNG DGFPDLIFAL DMSFEAVPTY SGLVLMQNLG DGSFSEPMNY LEPFGTEQIS IADFNGDGAP DVLVAPYFYD GFTPSVLFLN QGGDSLSLTA TPNSVTQGED VVLRATLNAV LSGASGSVTF TSNGAVIGTA ELSTGSVAEL TTSELPAGTD TVTATYAGDA NHNAATSAVA SVSVQSLAPS FSINATPPSL NLKAGQSGSV TLNLAANAMF SGSVSFTCSG LPASASCSFS PASVALDSGK TGTVTLQIKT AGTSQARAIT NRSLWTSAAG LALMQCLLLV LPIRRRKLAR LFARYSAGLL CLLMLVGISA CGGSSHDSSG GTPTGNSTIT VTGSASSGST TVTQTALISV SVTN
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