14 homologs were found in PanDaTox collection
for query gene Xcel_3139 on replicon NC_013530
Organism: Xylanimonas cellulosilytica DSM 15894



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013530  Xcel_3139  anti-sigma-factor antagonist  100 
 
 
140 aa  278  1e-74  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.287339  n/a   
 
 
-
 
NC_013521  Sked_35180  anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)  81.97 
 
 
124 aa  194  3e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_2965  anti-sigma-factor antagonist  73.81 
 
 
121 aa  171  3.9999999999999995e-42  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.496883  normal 
 
 
-
 
NC_013174  Jden_2417  anti-sigma-factor antagonist  62.39 
 
 
111 aa  143  1e-33  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3637  anti-sigma-factor antagonist  64.76 
 
 
115 aa  119  1.9999999999999998e-26  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.388001 
 
 
-
 
NC_009921  Franean1_6178  anti-sigma-factor antagonist  29.7 
 
 
166 aa  44.7  0.0005  Frankia sp. EAN1pec  Bacteria  normal  normal  0.185841 
 
 
-
 
NC_014151  Cfla_2762  anti-sigma-factor antagonist  32.95 
 
 
111 aa  43.5  0.0009  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000433544 
 
 
-
 
NC_007777  Francci3_0441  anti-sigma-factor antagonist domain-containing protein  31.4 
 
 
115 aa  42.7  0.002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0035  anti-sigma-factor antagonist  32.29 
 
 
116 aa  42.4  0.002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0872  anti-sigma-factor antagonist  28.85 
 
 
120 aa  41.2  0.005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_4483  anti-anti-sigma regulatory factor  33.33 
 
 
109 aa  41.2  0.005  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000247107  normal  0.911013 
 
 
-
 
NC_013131  Caci_1918  anti-sigma-factor antagonist  31.46 
 
 
127 aa  40.8  0.007  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0744  anti-sigma-factor antagonist (STAS) and sugar transfersase  27.27 
 
 
351 aa  40.4  0.008  Anabaena variabilis ATCC 29413  Bacteria  unclonable  0.00000000000102583  normal 
 
 
-
 
NC_009253  Dred_1103  anti-sigma-factor antagonist  25 
 
 
112 aa  40.4  0.009  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
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