Gene Francci3_0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0441 
Symbol 
ID3903630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp524017 
End bp524364 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content66% 
IMG OID637877772 
Productanti-sigma-factor antagonist domain-containing protein 
Protein accessionYP_479556 
Protein GI86739156 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGGTTG AGGTGACCGA CCGTGATGCC ATCGTCGTGC ATCCGGCCGG CGACATCGAC 
TATTCGTCCC TGGATCCCCT GCGCGAGGCA CTGCTCGACG CACGGGTCGC CGGAGTAAAA
GAGATCATCG TGGATCTGGA GCAGGTGAGC TTCCTCGACT CGCAGGGGTT GGCGGTCATC
CTGTTCGCCC ACCAGCGTCA GCGCTCGGCC GGTGGCCGTC TCGTGCTGCG TAACCTCAAC
GAGGACGCCT ACCGCCTGCT GCATGTCACG AACCTGAGTG CCGTGATAGA CGTCGATCAC
GGCGACTCCG CCCCCGCGCG CGGCCTGGCG ACCCGTCAGG GCGCCTGA
 
Protein sequence
MRVEVTDRDA IVVHPAGDID YSSLDPLREA LLDARVAGVK EIIVDLEQVS FLDSQGLAVI 
LFAHQRQRSA GGRLVLRNLN EDAYRLLHVT NLSAVIDVDH GDSAPARGLA TRQGA