Gene Dred_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1103 
Symbol 
ID4957075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1174998 
End bp1175336 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content39% 
IMG OID640180273 
Productanti-sigma-factor antagonist 
Protein accessionYP_001112463 
Protein GI134298967 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor
[TIGR02886] anti-sigma F factor antagonist 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTTGG ATATAGAACA GCAACAAGAA ACTTTGTTGG TTCGCTTGGT CGGAGAGCTA 
GACCTGGGTA TAGCAGATAA ATTGCGTAAA GCTTTAGATA ATCAGTTAAT CGAAAAAAGA
ATAAAGTATC TTATCCTAAA TATATCCCGA GTAACTTTTG TTGATAGTTC TGGACTGGGG
GTCATATTGG GACGTTATAA ACGTCTAGTA CATATAGGAG GTAAGGTGAT TCTGGTTGGA
GCACAGCCCC AGGTTCGAAG AATACTAGAA CTCTCAGGAC TGATGCAGAT TATGGAAGAA
TATCCCGATG AAAACTTGGC TCTGGCTAAG ATAGTTTAA
 
Protein sequence
MHLDIEQQQE TLLVRLVGEL DLGIADKLRK ALDNQLIEKR IKYLILNISR VTFVDSSGLG 
VILGRYKRLV HIGGKVILVG AQPQVRRILE LSGLMQIMEE YPDENLALAK IV