24 homologs were found in PanDaTox collection
for query gene Vapar_2479 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_2479  phage protein, HK97 gp10 family  100 
 
 
179 aa  357  5e-98  Variovorax paradoxus S110  Bacteria  normal  0.119601  n/a   
 
 
-
 
NC_010002  Daci_1638  HK97 family phage protein  31.87 
 
 
152 aa  81.3  0.000000000000006  Delftia acidovorans SPH-1  Bacteria  normal  0.048503  normal 
 
 
-
 
NC_007650  BTH_II1051  HK97 family phage protein  30.23 
 
 
140 aa  62  0.000000005  Burkholderia thailandensis E264  Bacteria  normal  0.325437  n/a   
 
 
-
 
NC_013411  GYMC61_0631  phage protein, HK97 gp10 family  26.47 
 
 
119 aa  60.1  0.00000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010498  EcSMS35_1193  HK97 family phage protein  29.87 
 
 
148 aa  58.9  0.00000003  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  0.00000986057 
 
 
-
 
NC_010623  Bphy_3391  HK97 family phage protein  29.47 
 
 
169 aa  57.8  0.00000008  Burkholderia phymatum STM815  Bacteria  normal  0.760734  hitchhiker  0.00000000275201 
 
 
-
 
NC_007434  BURPS1710b_1684  HK97 family phage protein  27.33 
 
 
140 aa  54.7  0.0000007  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0931  phage protein, HK97 gp10 family  27.45 
 
 
148 aa  54.3  0.0000008  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1544  phage protein, HK97 gp10 family  29.25 
 
 
148 aa  54.3  0.0000008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.0566453 
 
 
-
 
NC_011353  ECH74115_2178  phage protein, HK97 gp10 family  29.25 
 
 
148 aa  54.3  0.0000008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.00248961 
 
 
-
 
NC_011353  ECH74115_2242  phage protein, HK97 gp10 family  29.25 
 
 
148 aa  54.3  0.0000008  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.00000544361 
 
 
-
 
NC_010086  Bmul_3871  HK97 family phage protein  29.24 
 
 
140 aa  53.9  0.000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.557276  normal  0.0333668 
 
 
-
 
NC_011353  ECH74115_2888  phage protein, HK97 gp10 family  29.25 
 
 
148 aa  53.9  0.000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000220856 
 
 
-
 
NC_007204  Psyc_0458  hypothetical protein  27.12 
 
 
155 aa  52.8  0.000003  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.74928 
 
 
-
 
NC_007493  RSP_1640  hypothetical protein  26.7 
 
 
157 aa  51.2  0.000007  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_2232  HK97 family phage protein  26.7 
 
 
149 aa  50.8  0.000009  Enterobacter sp. 638  Bacteria  normal  normal  0.912858 
 
 
-
 
NC_010524  Lcho_3168  HK97 family phage protein  50 
 
 
156 aa  50.1  0.00002  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00719804 
 
 
-
 
NC_011725  BCB4264_A2627  phage protein, HK97 gp10 family  28.66 
 
 
144 aa  50.1  0.00002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_2590  HK97 family phage protein  48.65 
 
 
144 aa  46.2  0.0002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1888  HK97 family phage protein  47.62 
 
 
138 aa  45.4  0.0005  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1639  HK97 family phage protein  27.37 
 
 
146 aa  45.1  0.0006  Burkholderia pseudomallei 1710b  Bacteria  normal  0.851848  n/a   
 
 
-
 
NC_009049  Rsph17029_0639  HK97 family phage protein  26.92 
 
 
154 aa  41.2  0.008  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_0283  HK97 family phage protein  47.37 
 
 
137 aa  41.2  0.009  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_6190  hypothetical protein  51.72 
 
 
148 aa  40.8  0.01  Agrobacterium vitis S4  Bacteria  normal  0.608804  n/a   
 
 
-
 
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