Gene EcSMS35_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1193 
Symbol 
ID6144318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1198036 
End bp1198482 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content51% 
IMG OID641616071 
ProductHK97 family phage protein 
Protein accessionYP_001743254 
Protein GI170683712 
COG category 
COG ID 
TIGRFAM ID[TIGR01725] phage protein, HK97 gp10 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00000986057 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTCA GTCTTGATTT TTCAGGTCTG GCGGATATTG CACGGGATCT GGAGACGCTC 
AGCAGGGCAG AAAATAATAA GGTACTGCGC GATGCCACCC GTGCCGGTGC TGAAGTTATG
CGGGATGCAG TTGTTGAACG TGCGCCGGAG CGAACCGGGA AACTGAAGAA AAATGTGGTT
GTTCTCACTC AGCGTTCAAA GCGTCGCGGG GAAATTATCT CGGGTGTCCA CATTCGTGGA
CGGAATCTGC GAACCGGAAA CAGTGATAAC AGCATGAAAG CCAGTGATCC CCGAAATGCG
TTTTACTGGC GCTTTGTGGA GCTGGGAACG ATAAACATGC CCGCGCATCC GTTCATTCGC
CCGGCTTTCG ATACGACAGA GGAACTGGCA GCACAGATTG CCATACAGCG AATGAATCAG
GCTATTGATG AGGTCTTAAG TAAATGA
 
Protein sequence
MDFSLDFSGL ADIARDLETL SRAENNKVLR DATRAGAEVM RDAVVERAPE RTGKLKKNVV 
VLTQRSKRRG EIISGVHIRG RNLRTGNSDN SMKASDPRNA FYWRFVELGT INMPAHPFIR
PAFDTTEELA AQIAIQRMNQ AIDEVLSK