10 homologs were found in PanDaTox collection
for query gene Tbd_1211 on replicon NC_007404
Organism: Thiobacillus denitrificans ATCC 25259



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007404  Tbd_1211  HNH nuclease  100 
 
 
168 aa  336  9e-92  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007614  Nmul_A2368  HNH nuclease  46.99 
 
 
166 aa  171  3.9999999999999995e-42  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2131  HNH nuclease  44.86 
 
 
185 aa  162  3e-39  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0908  hypothetical protein  28.49 
 
 
197 aa  72.8  0.000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.727707  n/a   
 
 
-
 
NC_009972  Haur_3411  hypothetical protein  41.67 
 
 
198 aa  65.5  0.0000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3561  hypothetical protein  33.33 
 
 
200 aa  56.6  0.0000002  Geobacter lovleyi SZ  Bacteria  normal  0.362585  n/a   
 
 
-
 
NC_007484  Noc_0498  hypothetical protein  32.35 
 
 
201 aa  55.5  0.0000003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1603  HNH endonuclease  31.82 
 
 
186 aa  43.5  0.001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.21186  normal 
 
 
-
 
NC_013235  Namu_1825  HNH endonuclease  38.89 
 
 
200 aa  42.7  0.003  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00061732  normal  0.125783 
 
 
-
 
NC_013159  Svir_11830  restriction endonuclease  37.5 
 
 
166 aa  41.6  0.005  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.16312 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>