Gene Acel_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1603 
Symbol 
ID4486507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1804036 
End bp1804596 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content68% 
IMG OID639730389 
ProductHNH endonuclease 
Protein accessionYP_873361 
Protein GI117928810 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.21186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGGTTGA GTAGCCACGC CCTGGTCCTC AATGCGACCT ACGAGCCGAT CGGCGTCGTA 
TCCGGCCGCC GGGCGTTGCT GCTCGTCCTT GCCGCCAAGG CGGTGGCGCT CGAACCCGGC
GAGCAGGTCT GGCACAGCGC GAGCGTGGCG GTTCCGGTTC CCGCGGTCGT CCGGTTGACG
CGCTTCGTAA AAGTCCCGTA CCGGGCAACC GTTCCGTTGA CCCGCCGGGG TGTTTTCCTT
CGGGACGGCG GCCGCTGCGT CTACTGCGAT GCGCCTGCGA CCAGCCTCGA CCATGTCGTG
CCACGAAGCC GCGGGGGCGC GCACGTGTGG GAGAACGTCG TCTCGTGCTG CCGGCGGTGC
AACCACATCA AAGGCGATCG GACGGTTGCG GAATTGGGGT GGCGGCTGCG ACGTCCGCCT
CGTGCGCCCA GCGGTATTGC CTGGCGGATT CTCGGCACCG GCCGCAGCGA TCCCCGCTGG
ATTCCCTACC TCGACGGGCT TGGTATCGAC AGCTCGGTGT TCGGCCGGTT CCTCGGGGTT
GAGCAGTCCG CAAGCGCATG A
 
Protein sequence
MGLSSHALVL NATYEPIGVV SGRRALLLVL AAKAVALEPG EQVWHSASVA VPVPAVVRLT 
RFVKVPYRAT VPLTRRGVFL RDGGRCVYCD APATSLDHVV PRSRGGAHVW ENVVSCCRRC
NHIKGDRTVA ELGWRLRRPP RAPSGIAWRI LGTGRSDPRW IPYLDGLGID SSVFGRFLGV
EQSASA