10 homologs were found in PanDaTox collection
for query gene Swoo_2397 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010506  Swoo_2397  TetR family transcriptional regulator  100 
 
 		 194 aa  403  1.0000000000000001e-112  Shewanella woodyi ATCC 51908  Bacteria  normal  0.460379  normal  0.0825777 
 
 
-
 
NC_010338  Caul_2669  hypothetical protein  30.65 
 
 		 196 aa  93.6  2e-18  Caulobacter sp. K31  Bacteria  normal  0.395376  normal  1 
 
 
-
 
NC_009719  Plav_1125  TetR family transcriptional regulator  31.72 
 
 		 200 aa  84.7  9e-16  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.849198  normal  1 
 
 
-
 
NC_008048  Sala_0301  TetR family transcriptional regulator  29.53 
 
 		 207 aa  83.2  0.000000000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  1  normal  0.212759 
 
 
-
 
NC_009719  Plav_0361  TetR family transcriptional regulator  28.26 
 
 		 192 aa  76.6  0.0000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009943  Dole_2544  TetR family transcriptional regulator  42.11 
 
 		 206 aa  52.8  0.000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.0158307  n/a   
 
 
-
 
NC_007954  Sden_0974  regulatory protein, TetR  33.73 
 
 		 205 aa  45.1  0.0007  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_4147  TetR family transcriptional regulator  36.36 
 
 		 234 aa  42  0.006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012034  Athe_1516  transcriptional regulator, TetR family  35.09 
 
 		 203 aa  41.6  0.008  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2650  transcriptional regulator, TetR family  36.67 
 
 		 211 aa  41.6  0.008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
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