Gene Sden_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0974 
Symbol 
ID4016744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp1114940 
End bp1115557 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content46% 
IMG OID637954964 
Productregulatory protein, TetR 
Protein accessionYP_561985 
Protein GI91792334 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCAGTC GCGCCCTTGA AAATAAACCC GCCACCAATA AGCGCCAAGC CATTTTAGAT 
ACCGCCTTGA ATTTGTTTGT CACTCAGGGT TTTCATGGCA GCTCGACCGC GCAAATAGCC 
CGTCAGGCTG GGGTTGCCAC AGGGACCTTA TTTCATCACT TTTCATCGAA GGAAATGTTA 
TTAAACGAAC TCTTTCTATC GATTAAACAA GAGTTTGCCG AAGACATCTT GCAGGTGTTT 
CAAGGATTGG ATTTAGATAC TCATCCGCAA CGAAGCCTTA AAGCTTCTGC TCAAAAATTG 
TGGAACAGGG CCATAGACTG GGCCATAGCC AATCCCATCA AACAGCGATT TTTCTTACTT 
TATGCCTTAT CCCCTGAACT TGCCGTTGAT GTACGTGAGC AAGCCATGAA CTCTATATTG 
GGCTTTATTT CGAAGCTGTT GACCCAAGGG CAAGCCATGG GAGAAATTGT CACTTTCCCC 
CTAGGGCTGA TGCTAGACAA TTGCCATGGC CAATACTTGG CCAGCATTCG TTTTTTTACC 
GACTATCCCG CACTTGGCCA AGACCCACTG CACAGAGAAG CAAGCTTCGA ACTGTTTTGG 
CGCTCCATTA AAGCCTAA
 
Protein sequence
MTSRALENKP ATNKRQAILD TALNLFVTQG FHGSSTAQIA RQAGVATGTL FHHFSSKEML 
LNELFLSIKQ EFAEDILQVF QGLDLDTHPQ RSLKASAQKL WNRAIDWAIA NPIKQRFFLL 
YALSPELAVD VREQAMNSIL GFISKLLTQG QAMGEIVTFP LGLMLDNCHG QYLASIRFFT 
DYPALGQDPL HREASFELFW RSIKA