18 homologs were found in PanDaTox collection
for query gene Ssed_2457 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_2457  hypothetical protein  100 
 
 		 240 aa  494  1e-139  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.418113 
 
 
-
 
NC_009831  Ssed_1731  hypothetical protein  45.53 
 
 		 240 aa  229  3e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  1  hitchhiker  0.000000145681 
 
 
-
 
NC_009831  Ssed_2091  hypothetical protein  35.29 
 
 		 245 aa  122  5e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0353766  normal  1 
 
 
-
 
NC_009901  Spea_3578  LuxR family transcriptional regulator  31.69 
 
 		 255 aa  66.6  0.0000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  0.920861  n/a   
 
 
-
 
NC_004347  SO_4624  LuxR family transcriptional regulator  27.74 
 
 		 248 aa  63.9  0.000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_0690  LuxR family transcriptional regulator  29.08 
 
 		 252 aa  62.4  0.000000006  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_4197  response regulator receiver protein  28.36 
 
 		 248 aa  62  0.000000008  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_4329  LuxR family transcriptional regulator  28.36 
 
 		 248 aa  62  0.000000008  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_2142  hypothetical protein  35.24 
 
 		 253 aa  59.3  0.00000006  Shewanella sediminis HAW-EB3  Bacteria  normal  0.532898  normal  0.0656443 
 
 
-
 
NC_009831  Ssed_0526  hypothetical protein  28.21 
 
 		 267 aa  57.8  0.0000002  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_0755  hypothetical protein  28.78 
 
 		 249 aa  57  0.0000003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.684175  hitchhiker  0.00000180736 
 
 
-
 
NC_008577  Shewana3_4008  LuxR family transcriptional regulator  27.91 
 
 		 248 aa  56.2  0.0000005  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_3799  response regulator receiver protein  27.61 
 
 		 248 aa  55.5  0.0000007  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_2141  hypothetical protein  31.53 
 
 		 277 aa  52  0.000009  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.0962248 
 
 
-
 
NC_009831  Ssed_2144  hypothetical protein  39.44 
 
 		 253 aa  50.1  0.00003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.389277  normal  0.0100675 
 
 
-
 
NC_009831  Ssed_3996  hypothetical protein  35.63 
 
 		 185 aa  42.4  0.007  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.41061 
 
 
-
 
NC_009831  Ssed_1969  hypothetical protein  44.44 
 
 		 233 aa  42  0.009  Shewanella sediminis HAW-EB3  Bacteria  normal  0.894379  normal  1 
 
 
-
 
NC_007650  BTH_II0851  DNA-binding response regulator  43.75 
 
 		 223 aa  42  0.01  Burkholderia thailandensis E264  Bacteria  normal  0.0464733  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>