16 homologs were found in PanDaTox collection
for query gene Ssed_1731 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_1731  hypothetical protein  100 
 
 		 240 aa  494  1e-139  Shewanella sediminis HAW-EB3  Bacteria  normal  1  hitchhiker  0.000000145681 
 
 
-
 
NC_009831  Ssed_2457  hypothetical protein  45.53 
 
 		 240 aa  229  3e-59  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.418113 
 
 
-
 
NC_009831  Ssed_2091  hypothetical protein  34.98 
 
 		 245 aa  123  3e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0353766  normal  1 
 
 
-
 
NC_009901  Spea_3578  LuxR family transcriptional regulator  28.21 
 
 		 255 aa  68.6  0.00000000008  Shewanella pealeana ATCC 700345  Bacteria  normal  0.920861  n/a   
 
 
-
 
NC_009831  Ssed_0690  LuxR family transcriptional regulator  26.8 
 
 		 252 aa  62.8  0.000000005  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_2141  hypothetical protein  31.54 
 
 		 277 aa  60.8  0.00000002  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.0962248 
 
 
-
 
NC_009831  Ssed_2142  hypothetical protein  27.07 
 
 		 253 aa  59.3  0.00000005  Shewanella sediminis HAW-EB3  Bacteria  normal  0.532898  normal  0.0656443 
 
 
-
 
NC_009831  Ssed_0526  hypothetical protein  25 
 
 		 267 aa  59.3  0.00000006  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_4197  response regulator receiver protein  23.32 
 
 		 248 aa  54.3  0.000002  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_4329  LuxR family transcriptional regulator  23.32 
 
 		 248 aa  54.3  0.000002  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_4624  LuxR family transcriptional regulator  24.24 
 
 		 248 aa  51.6  0.00001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_4008  LuxR family transcriptional regulator  22.63 
 
 		 248 aa  51.6  0.00001  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_0755  hypothetical protein  30.67 
 
 		 249 aa  49.3  0.00005  Shewanella sediminis HAW-EB3  Bacteria  normal  0.684175  hitchhiker  0.00000180736 
 
 
-
 
NC_009831  Ssed_2144  hypothetical protein  27.89 
 
 		 253 aa  47  0.0003  Shewanella sediminis HAW-EB3  Bacteria  normal  0.389277  normal  0.0100675 
 
 
-
 
NC_009438  Sputcn32_3799  response regulator receiver protein  24.56 
 
 		 248 aa  43.5  0.003  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_1969  hypothetical protein  25.85 
 
 		 233 aa  42.4  0.007  Shewanella sediminis HAW-EB3  Bacteria  normal  0.894379  normal  1 
 
 
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