11 homologs were found in PanDaTox collection
for query gene Sros_3322 on replicon NC_013595
Organism: Streptosporangium roseum DSM 43021



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013595  Sros_3322  hypothetical protein  100 
 
 
429 aa  828    Streptosporangium roseum DSM 43021  Bacteria  normal  0.928519  normal  0.276614 
 
 
-
 
NC_012669  Bcav_1592  major facilitator superfamily MFS_1  65.81 
 
 
435 aa  491  1e-137  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.241693  normal 
 
 
-
 
NC_013165  Shel_01230  Na+/melibiose symporter-like transporter  38.69 
 
 
435 aa  276  3e-73  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1203  major facilitator superfamily MFS_1  39.22 
 
 
457 aa  259  6e-68  Eggerthella lenta DSM 2243  Bacteria  normal  0.831923  normal  0.147172 
 
 
-
 
NC_002967  TDE1731  hypothetical protein  28.37 
 
 
467 aa  176  5e-43  Treponema denticola ATCC 35405  Bacteria  decreased coverage  0.00706224  n/a   
 
 
-
 
NC_012560  Avin_41890  MFS family sugar transporter  25.16 
 
 
449 aa  51.2  0.00004  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II0295  EmrB/QacA family drug resistance transporter  33.61 
 
 
565 aa  48.9  0.0002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_3562  drug resistance transporter, Bcr/CflA subfamily  33.71 
 
 
392 aa  44.3  0.004  Thauera sp. MZ1T  Bacteria  normal  0.424378  n/a   
 
 
-
 
NC_013739  Cwoe_3289  major facilitator superfamily MFS_1  28.72 
 
 
416 aa  43.9  0.006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0806  major facilitator transporter  28.99 
 
 
396 aa  43.5  0.007  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.674294 
 
 
-
 
NC_011369  Rleg2_0840  major facilitator superfamily MFS_1  26.89 
 
 
413 aa  43.5  0.007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>